RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 FAM184AQ8NB25 1140 aa3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 BEST4Q8NFU0 473 aa3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 STXBP6Q8NFX7 210 aa3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 OR6C4Q8NGE1 309 aa3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 OR5D13Q8NGL4 314 aa3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 OR4D5Q8NGN0 318 aa3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 OR6T1Q8NGN1 323 aa3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 OR1F12Q8NHA8 337 aa3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 SDSLQ96GA7 329 aa3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 CAPS2Q9BXY5 557 aa3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 DUSP16Q9BY84 665 aa3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 GCOM2Q9BZD3 368 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 IQCGQ9H095 443 aaKnown RBP3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 GNB4Q9HAV0 340 aa3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 TXLNGQ9NUQ3 528 aa3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 HYPKQ9NX55 129 aa3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 LCMT1Q9UIC8 334 aa3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 ZNF221Q9UK13 617 aa3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 CHTOPQ9Y3Y2 248 aaKnown RBP3.97□□□□□ -1.77
HMGB1P10-201ENST00000395823 MROH5Q6ZUA9 1318 aa3.96□□□□□ -1.77
HMGB1P10-201ENST00000395823 TRAV26-1A0A087WT03 109 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 ZNF840PA6NDX5 716 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 G3V4G9 280 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 CETN3O15182 167 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 NMT2O60551 498 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 B4GALT2O60909 372 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 SNRPCP09234 159 aaKnown RBP3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 IDSP22304 550 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 RFC4P35249 363 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 P2RY1P47900 373 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 BDH1Q02338 343 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 FCHO2Q0JRZ9 810 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 LAGE3Q14657 143 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 ABRAXAS2Q15018 415 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 EXOC3L2Q2M3D2 409 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 AADACL4Q5VUY2 407 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 AP1ARQ63HQ0 302 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 TMEM225Q6GV28 225 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 EFL1Q7Z2Z2 1120 aaKnown RBP3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 IFNEQ86WN2 208 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 KRTAP7-1Q8IUC3 87 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 SPERTQ8NA61 448 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 CSNK1G2-AS1Q8NCQ2 148 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 BHLHE23Q8NDY6 225 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 OR2T33Q8NG76 320 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 OR9A4Q8NGU2 314 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 ADAMTS16Q8TE57 1224 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 ITLN1Q8WWA0 313 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 BADQ92934 168 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 C9orf85Q96MD7 179 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 NPY6RQ99463 290 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 PLIN2Q99541 437 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 GAL3ST1Q99999 423 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 SLC7A5P2Q9GIP4 190 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 GLIPR2Q9H4G4 154 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 HEXA-AS1Q9H8Q6 139 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 CRLF2Q9HC73 371 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 ARMCX1Q9P291 453 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 MEMO1Q9Y316 297 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 STYXL1Q9Y6J8 313 aa3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 TCF20Q9UGU0 1960 aaKnown RBP3.96□□□□□ -1.78
HMGB1P10-201ENST00000395823 FRMPD4Q14CM0 1322 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 A0A1W2PNV4 684 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 XKRY2A2RUG3 117 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 SAGE2PA6NJ88 616 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 ZNF487B1APH4 448 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 MSH4O15457 936 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 POLR2DO15514 142 aaKnown RBP3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 PI15O43692 258 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 TRIM3O75382 744 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 SERPINB2P05120 415 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 ATP5A1P25705 553 aaKnown RBP3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 ACVR1BP36896 505 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 MAGEA8P43361 318 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 ALDH3B2P48448 385 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 ERVPABLB-1P60509 514 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 OC90Q02509 493 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 ST3GAL3Q11203 375 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 ZNF154Q13106 437 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 DCST2Q5T1A1 773 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 GPRIN3Q6ZVF9 776 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 CCDC80Q76M96 950 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 SPATA24Q86W54 205 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 OR8K3Q8NH51 312 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 ARNTL2Q8WYA1 636 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 RAPGEF5Q92565 580 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 C7orf34Q96L11 122 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 HCAR1Q9BXC0 346 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 ZBP1Q9H171 429 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 VCPKMTQ9H867 229 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 FN3KRPQ9HA64 309 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 EXOSC3Q9NQT5 275 aaKnown RBP3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 PRODH2Q9UF12 536 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 RASD1Q9Y272 281 aa3.95□□□□□ -1.78
HMGB1P10-201ENST00000395823 CECR2Q9BXF3 1484 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 NSD2O96028 1365 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 OR6C65A6NJZ3 312 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 KRTAP16-1A8MUX0 517 aa3.94□□□□□ -1.78
HMGB1P10-201ENST00000395823 H3BMQ9 156 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms