RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 SLC25A35Q3KQZ1 300 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 OLFML2AQ68BL7 652 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 METAP1DQ6UB28 335 aaPredicted RBP12.35□□□□□ -0.43
NFKB1-202ENST00000394820 FAM180AQ6UWF9 173 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 ZNF782Q6ZMW2 699 aaPredicted RBP12.35□□□□□ -0.43
NFKB1-202ENST00000394820 MSANTD1Q6ZTZ1 278 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 ZNF767PQ75MW2 155 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 ZNF627Q7L945 461 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 PLCZ1Q86YW0 608 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 LINC00471Q8N535 108 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 OR52E4Q8NGH9 312 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 GNPDA2Q8TDQ7 276 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 CASTOR1Q8WTX7 329 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 OSTF1Q92882 214 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 CXorf40BQ96DE9 158 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 SLC41A3Q96GZ6 507 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 BTBD2Q9BX70 525 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 ZMAT3Q9HA38 289 aaKnown RBP12.35□□□□□ -0.43
NFKB1-202ENST00000394820 TMEM27Q9HBJ8 222 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 HINT3Q9NQE9 182 aaKnown RBP12.35□□□□□ -0.43
NFKB1-202ENST00000394820 SEMA4GQ9NTN9 838 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 PLEKHB1Q9UF11 243 aaPredicted RBP12.35□□□□□ -0.43
NFKB1-202ENST00000394820 ATG4BQ9Y4P1 393 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 COL4A6Q14031 1691 aa12.35□□□□□ -0.43
NFKB1-202ENST00000394820 LRRN3E7EW58 273 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 ATP6V1G2-DDX39BF2Z307 99 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 EFCAB14O75071 495 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 ARHGEF15O94989 841 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 CA3P07451 260 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 RPS5P46782 204 aaKnown RBP12.34□□□□□ -0.43
NFKB1-202ENST00000394820 FAM78AQ5JUQ0 283 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 FAM71E1Q6IPT2 247 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 GDPGP1Q6ZNW5 385 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 RTL4Q6ZR62 310 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 HDDC3Q8N4P3 179 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 CHST4Q8NCG5 386 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 MOSPD2Q8NHP6 518 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 TMEM163Q8TC26 289 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 ZFAND1Q8TCF1 268 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 TSEN15Q8WW01 171 aaKnown RBP12.34□□□□□ -0.43
NFKB1-202ENST00000394820 HSPA12BQ96MM6 686 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 LRRN3Q9H3W5 708 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 BRF2Q9HAW0 419 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 FTSJ1Q9UET6 329 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 STON1Q9Y6Q2 735 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 LCMT2O60294 686 aaKnown RBP12.34□□□□□ -0.43
NFKB1-202ENST00000394820 HMGN1P05114 100 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 AK4P27144 223 aaPredicted RBP12.34□□□□□ -0.43
NFKB1-202ENST00000394820 TLX1P31314 330 aaPredicted RBP12.34□□□□□ -0.43
NFKB1-202ENST00000394820 KCNJ5P48544 419 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 DOC2BQ14184 412 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 GALEQ14376 348 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 PRSS53Q2L4Q9 553 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 ESCO2Q56NI9 601 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 TMEM31Q5JXX7 168 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 YOD1Q5VVQ6 348 aaPredicted RBP12.34□□□□□ -0.43
NFKB1-202ENST00000394820 FAAH2Q6GMR7 532 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 TSEN54Q7Z6J9 526 aaKnown RBP12.34□□□□□ -0.43
NFKB1-202ENST00000394820 ZNF680Q8NEM1 530 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 TM4SF18Q96CE8 201 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 PTCHD1Q96NR3 888 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 KXD1Q9BQD3 176 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 SLITRK2Q9H156 845 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 OR52D1Q9H346 318 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 NDUFB11Q9NX14 153 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 RABL2BQ9UNT1 228 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 ANAPC1Q9H1A4 1944 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 C1orf226A1L170 272 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 ANXA2P2A6NMY6 339 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 MRPS14O60783 128 aaKnown RBP12.34□□□□□ -0.43
NFKB1-202ENST00000394820 OR6A2O95222 327 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 TCRBP04435 133 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 ANXA2P07355 339 aaKnown RBP12.34□□□□□ -0.43
NFKB1-202ENST00000394820 ACADMP11310 421 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 BMP8BP34820 402 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 MRPL19P49406 292 aaKnown RBP12.34□□□□□ -0.43
NFKB1-202ENST00000394820 E2F1Q01094 437 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 BIKQ13323 160 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 ASAH1Q13510 395 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 FAM109BQ6ICB4 259 aaPredicted RBP12.34□□□□□ -0.43
NFKB1-202ENST00000394820 ERN2Q76MJ5 926 aaKnown RBP12.34□□□□□ -0.43
NFKB1-202ENST00000394820 BMP8AQ7Z5Y6 402 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 TMPRSS12Q86WS5 348 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 DCUN1D3Q8IWE4 304 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 ZNF676Q8N7Q3 588 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 THEM6Q8WUY1 208 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 GHSRQ92847 366 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 AUNIPQ9H7T9 357 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 FOLH1BQ9HBA9 442 aa12.34□□□□□ -0.43
NFKB1-202ENST00000394820 ATXN7L1Q9ULK2 861 aaPredicted RBP12.34□□□□□ -0.43
NFKB1-202ENST00000394820 GPR55Q9Y2T6 319 aaPredicted RBP12.34□□□□□ -0.43
NFKB1-202ENST00000394820 RGS9O75916 674 aaPredicted RBP12.33□□□□□ -0.44
NFKB1-202ENST00000394820 MNDAP41218 407 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 EXOSC7Q15024 291 aaKnown RBP12.33□□□□□ -0.44
NFKB1-202ENST00000394820 SMAD2Q15796 467 aaKnown RBP12.33□□□□□ -0.44
NFKB1-202ENST00000394820 FXNQ16595 210 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 OR4C11Q6IEV9 310 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 VITQ6UXI7 678 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 UBE2Q1Q7Z7E8 422 aa12.33□□□□□ -0.44
NFKB1-202ENST00000394820 RANBP3LQ86VV4 465 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms