RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 NFYCQ13952 458 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 MAPK14Q16539 360 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 MMEL1Q495T6 779 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 RUNDC3AQ59EK9 446 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 C1orf185Q5T7R7 199 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 ARSKQ6UWY0 536 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 RPTNQ6XPR3 784 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 B3GNT6Q6ZMB0 384 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 RETREG3Q86VR2 466 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 ULK2Q8IYT8 1036 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 SLC38A5Q8WUX1 472 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 VDAC3Q9Y277 283 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 CAPN7Q9Y6W3 813 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 MED12Q93074 2177 aa17.21■□□□□ 0.34
PDLIM7-204ENST00000393546 OIP5O43482 229 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 CYP7B1O75881 506 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 NUDT14O95848 222 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 BCHEP06276 602 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 RNF224P0DH78 156 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 BMP2P12643 396 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 PEPDP12955 493 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 STARP49675 285 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 SUMO3P55854 103 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 FGFBP1Q14512 234 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 BCL2A1Q16548 175 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 DCST1Q5T197 706 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 CBLN3Q6UW01 205 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 TOR1AIP2Q8NFQ8 470 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 OR5W2Q8NH69 310 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 ZBTB8AQ96BR9 441 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 CGREF1Q99674 301 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 LAT2Q9GZY6 243 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 MED17Q9NVC6 651 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 STOML1Q9UBI4 398 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 ICAM5Q9UMF0 924 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 SLC35A3Q9Y2D2 325 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 PCNX1Q96RV3 2341 aa17.2■□□□□ 0.34
PDLIM7-204ENST00000393546 A0A0G2JPF8 293 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 CENPVL1A0A0U1RR11 272 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 LOC100653049A0A140TA62 436 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 OR2M5A3KFT3 312 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 AGAP5A6NIR3 686 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 BBIP1A8MTZ0 92 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 HNRNPCL2B2RXH8 293 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 HNRNPCL3B7ZW38 293 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 C5orf58C9J3I9 102 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 SNX3O60493 162 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 HNRNPCL1O60812 293 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 KRT34O76011 436 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 DBIP07108 87 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 HNRNPCL4P0DMR1 293 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 IL7RP16871 459 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 GPX2P18283 190 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 LHX2P50458 406 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 KCNJ10P78508 379 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 ADORA2A-AS1P86434 159 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 SRYQ05066 204 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 PMPCAQ10713 525 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 CYLC2Q14093 348 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 MAPK11Q15759 364 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 NDUFAF6Q330K2 333 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 COQ5Q5HYK3 327 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 MRGPRGQ86SM5 289 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 PEX5LQ8IYB4 626 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 TMCO5AQ8N6Q1 288 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 METTL25Q8N6Q8 603 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 OR5M1Q8NGP8 315 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 TMEM19Q96HH6 336 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 ANKRD27Q96NW4 1050 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 THUMPD3Q9BV44 507 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 QRSL1Q9H0R6 528 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 RUBCNLQ9H714 662 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 A4GALTQ9NPC4 353 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 ARMCX1Q9P291 453 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 ZNF337Q9Y3M9 751 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 L3MBTL1Q9Y468 752 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 DOPEY2Q9Y3R5 2298 aa17.19■□□□□ 0.34
PDLIM7-204ENST00000393546 FBP2O00757 339 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 NUDT7P0C024 238 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 UBTFL6P0CB48 400 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 ZNF17P17021 662 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 POU3F2P20265 443 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 EIF1P41567 113 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 CBFBQ13951 182 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 TMEM44Q2T9K0 475 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 PLPPR5Q32ZL2 321 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 GCNT6Q5T4J0 391 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 PRAMEF8Q5VWM4 474 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 PRAMEF7Q5VXH5 474 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 RTL6Q6ICC9 239 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 XKRXQ6PP77 449 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 NCCRP1Q6ZVX7 275 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 HMGN2P46Q86SG4 172 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 MTDHQ86UE4 582 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 SNX32Q86XE0 403 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 CMIPQ8IY22 773 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 GTPBP8Q8N3Z3 284 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 RPRMLQ8N4K4 120 aa17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 ZNF808Q8N4W9 903 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-204ENST00000393546 PCYOX1LQ8NBM8 494 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms