RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 TBR1Q16650 682 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 ZNF766Q5HY98 468 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 SWT1Q5T5J6 900 aaKnown RBP3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 PRAMEF20Q5VT98 475 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 WBP2NLQ6ICG8 309 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 ZNF613Q6PF04 617 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 LYPD8Q6UX82 237 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 DEF8Q6ZN54 512 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 C16orf47Q6ZP98 133 aaPredicted RBP3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 PLEKHM3Q6ZWE6 761 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 MARCH3Q86UD3 253 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 VRK2Q86Y07 508 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 PLCZ1Q86YW0 608 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 ZDHHC21Q8IVQ6 265 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 LINC00471Q8N535 108 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 OR5W2Q8NH69 310 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 VANGL1Q8TAA9 524 aaPredicted RBP3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 GRHL3Q8TE85 626 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 DUSP19Q8WTR2 217 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 CANT1Q8WVQ1 401 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 ST8SIA1Q92185 356 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 MPP4Q96JB8 637 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 FNDC11Q9BVV2 318 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 QRSL1Q9H0R6 528 aaKnown RBP3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 RASSF4Q9H2L5 321 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 VCXQ9H320 206 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 VCX3BQ9H321 246 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 DENND2DQ9H6A0 471 aaPredicted RBP3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 DCLRE1BQ9H816 532 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 REEP1Q9H902 201 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 ZFP64Q9NPA5 681 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 IL1RAPQ9NPH3 570 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 FBXO34Q9NWN3 711 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 ANKRD10Q9NXR5 420 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 QPCTLQ9NXS2 382 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 DKKL1Q9UK85 242 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 TMCC3Q9ULS5 477 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 RRP15Q9Y3B9 282 aaKnown RBP3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 ENPP4Q9Y6X5 453 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 V9GYQ6 96 aa3.24□□□□□ -1.89
ATP2B1-203ENST00000393164 CCDC88CQ9P219 2028 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 IGLV3-32A0A0A0MS00 114 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 NPIPA5A0A0B4J1W7 369 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 TRAPPC13A5PLN9 417 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 ANKUB1A6NFN9 424 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 GJE1A6NN92 205 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 NPIPA7E9PJI5 369 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 SNPHO15079 494 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 PEX1O43933 1283 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 NME2P1O60361 137 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 CDC40O60508 579 aaKnown RBP eCLIP3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 OR5F1O95221 314 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 LDLRP01130 860 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 NPIPA8P0DM63 369 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 CCL3P10147 92 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 NME2P22392 152 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 ADH6P28332 368 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 RRM2P31350 389 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 RYKP34925 604 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 DSCR4P56555 118 aaPredicted RBP3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 SKP2Q13309 424 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 ZNF169Q14929 603 aaPredicted RBP3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 TOMM20Q15388 145 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 MAPK11Q15759 364 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 NRF1Q16656 503 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 DUSP7Q16829 419 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 COL28A1Q2UY09 1125 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 GLYR1Q49A26 553 aaPredicted RBP3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 TIGD3Q6B0B8 471 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 SPINK14Q6IE38 97 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 ULK3Q6PHR2 472 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 C5orf46Q6UWT4 87 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 ASB18Q6ZVZ8 466 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 PIWIL3Q7Z3Z3 882 aaKnown RBP3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 CDK20Q8IZL9 346 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 GATSQ8NAP1 163 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 FAM71CQ8NEG0 241 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 RNF217Q8TC41 542 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 PHF10Q8WUB8 498 aaKnown RBP3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 EXTL1Q92935 676 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 UTP4Q969X6 686 aaKnown RBP3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 ZBTB8AQ96BR9 441 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 ARSGQ96EG1 525 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 DUS3LQ96G46 650 aaKnown RBP3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 SH3YL1Q96HL8 342 aaPredicted RBP3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 MRGPRX4Q96LA9 322 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 PRRC1Q96M27 445 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 HS6ST2Q96MM7 605 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 NODALQ96S42 347 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 EPYCQ99645 322 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 MCHR1Q99705 422 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 PIP5K1AQ99755 562 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 ARHGDIGQ99819 225 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 CHID1Q9BWS9 393 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 OSBPL10Q9BXB5 764 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 NDEL1Q9GZM8 345 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 ANKRD19PQ9H560 264 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 C12orf10Q9HB07 376 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 C8orf4Q9NR00 106 aa3.23□□□□□ -1.89
ATP2B1-203ENST00000393164 ARMC1Q9NVT9 282 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms