RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 POMT1Q9Y6A1 747 aa-0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 S4R3C0 116 aa-0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 ZNF469Q96JG9 3925 aaPredicted RBP-0.02□□□□□ -2.41
RNU6-239P-201ENST00000390990 GRIN2DO15399 1336 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 HTR3EA5X5Y0 456 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 ZNF705EA8MWA4 302 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 ATP9AO75110 1047 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 NME6O75414 186 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 RAD51DO75771 328 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 SRP72O76094 671 aaKnown RBP-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 GFPT2O94808 682 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 ZFYP08048 801 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 ALPPL2P10696 532 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 WARSP23381 471 aaKnown RBP-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 PAX3P23760 479 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 PRKCIP41743 596 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 NPY4RP50391 375 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 GEMP55040 296 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 ST8SIA6P61647 398 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 SPIBQ01892 262 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 TNFRSF9Q07011 255 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 NRF1Q16656 503 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 CLPPQ16740 277 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 PNCKQ6P2M8 343 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 HACD2Q6Y1H2 254 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 MFSD6LQ8IWD5 586 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 KLHDC8AQ8IYD2 350 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 NKAPP1Q8N9T2 125 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 UXS1Q8NBZ7 420 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 ACER1Q8TDN7 264 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 ZFP90Q8TF47 636 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 UBLCP1Q8WVY7 318 aaPredicted RBP-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 NDRG1Q92597 394 aaKnown RBP-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 HAS2Q92819 552 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 INTS14Q96SY0 518 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 ZNF416Q9BWM5 594 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 SRXN1Q9BYN0 137 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 OR11A1Q9GZK7 315 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 TMEM245Q9H330 911 aa-0.03□□□□□ -2.41
RNU6-239P-201ENST00000390990 PTPRUQ92729 1446 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 A8MXE2 369 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 DNASE2O00115 360 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 SLC28A1O00337 649 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 UBE2CO00762 179 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 CFLARO15519 480 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 CD5LO43866 347 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 EIF3JO75822 258 aaKnown RBP-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 VAMP5O95183 116 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 CCDC175P0C221 793 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 PSMC3P17980 439 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 IL11P20809 199 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 STIP1P31948 543 aaKnown RBP-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 RPL4P36578 427 aaKnown RBP-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 FRKP42685 505 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 SGSHP51688 502 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 WASHC5Q12768 1159 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 SNTB2Q13425 540 aaKnown RBP-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 TWISTNBQ3B726 338 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 SAXO2Q658L1 398 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 STAC2Q6ZMT1 411 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 CAMK2N1Q7Z7J9 78 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 RANBP3LQ86VV4 465 aaPredicted RBP-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 ZNF573Q86YE8 665 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 OR1P1Q8NH06 330 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 OR5W2Q8NH69 310 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 KIF18AQ8NI77 898 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 P3H4Q92791 437 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 DNASE1L2Q92874 299 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 VPS33AQ96AX1 596 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 EXOSC8Q96B26 276 aaKnown RBP-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 CDKN2AIPNLQ96HQ2 116 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 FERMT1Q9BQL6 677 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 SRD5A3Q9H8P0 318 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 FAM114A2Q9NRY5 505 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 ZNF355PQ9NSJ1 428 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 DCAF13Q9NV06 445 aaKnown RBP-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 VPS54Q9P1Q0 977 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 CDH9Q9ULB4 789 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 CCL27Q9Y4X3 112 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 USP16Q9Y5T5 823 aa-0.04□□□□□ -2.42
RNU6-239P-201ENST00000390990 PLXNB1O43157 2135 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 A0A0G2JRQ6 117 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 LOC100131303A0A0U1RQF7 123 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 JCHAINP01591 159 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 GSTA1P08263 222 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 PTAFRP25105 342 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 KCNJ1P48048 391 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 RND3P61587 244 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 HERV-K104P63124 156 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 CNTN2Q02246 1040 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 PKN2Q16513 984 aaKnown RBP-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 TMEM183BQ1AE95 376 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 ATF7IP2Q5U623 682 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 TTC19Q6DKK2 380 aaPredicted RBP-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 SPATA19Q7Z5L4 167 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 SLC22A16Q86VW1 577 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 TMEM183AQ8IXX5 376 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 BPIFB2Q8N4F0 458 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 C15orf56Q8N910 161 aa-0.05□□□□□ -2.42
RNU6-239P-201ENST00000390990 GATSQ8NAP1 163 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms