RNA–Protein interactions for RNA: ENST00000382227.7

TMEM41A-202, Transcript of transmembrane protein 41A, humanhuman

TSL 4

Gene TMEM41A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-202ENST00000382227 TMCC2O75069 709 aa16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 CNOT4O95628 575 aaKnown RBP16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 PLAUP00749 431 aa16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 HMGN2P05204 90 aaKnown RBP16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 PABPC4LP0CB38 370 aaKnown RBP16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 DDX5P17844 614 aaKnown RBP16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 LRIG3Q6UXM1 1119 aa16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 HOMEZQ8IX15 550 aa16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 DDIASQ8IXT1 998 aa16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 C4orf33Q8N1A6 199 aa16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 EIF1ADQ8N9N8 165 aaKnown RBP16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 EPS8L3Q8TE67 593 aaKnown RBP16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 ROBO4Q8WZ75 1007 aa16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 CDS1Q92903 461 aa16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 CHMP6Q96FZ7 201 aa16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 STACQ99469 402 aa16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 TMEM204Q9BSN7 226 aa16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 PIGUQ9H490 435 aa16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 CXorf56Q9H5V9 222 aa16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 C12orf49Q9H741 205 aa16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 SIRT3Q9NTG7 399 aaPredicted RBP16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 ZNF701Q9NV72 531 aaPredicted RBP16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 GIN1Q9NXP7 522 aa16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 ATP6V1HQ9UI12 483 aa16.73■□□□□ 0.27
TMEM41A-202ENST00000382227 HS3ST1O14792 307 aa16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 FGF4P08620 206 aa16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 NID1P14543 1247 aa16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 ELK4P28324 431 aa16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 PCSK6P29122 969 aa16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 SHC1P29353 583 aa16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 SFTPDP35247 375 aa16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 HPCAL1P37235 193 aa16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 ZNF117Q03924 483 aa16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 FOXF1Q12946 379 aa16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 LASP1Q14847 261 aaKnown RBP16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 ZNF239Q16600 458 aaKnown RBP16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 MTERF4Q7Z6M4 381 aaKnown RBP16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 ZNF611Q8N823 705 aa16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 PHOSPHO1Q8TCT1 267 aa16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 RNF128Q8TEB7 428 aa16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 TWIST2Q8WVJ9 160 aa16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 REXO5Q96IC2 774 aaKnown RBP16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 TIGARQ9NQ88 270 aa16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 HEATR5AQ86XA9 2040 aa16.72■□□□□ 0.27
TMEM41A-202ENST00000382227 ROS1P08922 2347 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 TMEM114B3SHH9 223 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 TMEM233B4DJY2 109 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 PIP5K1BO14986 540 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 SCAMP2O15127 329 aaKnown RBP16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 CHRNGP07510 517 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 ATP6V1C1P21283 382 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 ADH6P28332 368 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 RPL3P39023 403 aaKnown RBP16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 ZNF844Q08AG5 666 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 RNPS1Q15287 305 aaKnown RBP16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 UGT3A2Q3SY77 523 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 TMEM201Q5SNT2 666 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 ZNF527Q8NB42 609 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 STEAP2Q8NFT2 490 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 OR7A2PQ8NGA2 310 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 ABHD3Q8WU67 409 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 CPNE4Q96A23 557 aaPredicted RBP16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 S100PBPQ96BU1 408 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 HDHD5Q9BXW7 423 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 HOXD1Q9GZZ0 328 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 TRAF6Q9Y4K3 522 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 SNX8Q9Y5X2 465 aa16.71■□□□□ 0.27
TMEM41A-202ENST00000382227 GJE1A6NN92 205 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 ZNF195O14628 629 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 EFNA2O43921 213 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 GCM2O75603 506 aaPredicted RBP16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 NUDT14O95848 222 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 LAMP1P11279 417 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 MAPK1P28482 360 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 P2RX1P51575 399 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 SUMO3P55854 103 aaPredicted RBP16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 ATP5J2P56134 94 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 KLHL26Q53HC5 615 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 ARL13AQ5H913 290 aaPredicted RBP16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 CDC73Q6P1J9 531 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 CBLN3Q6UW01 205 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 TFAP2EQ6VUC0 442 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 PRIMA1Q86XR5 153 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 GABRG1Q8N1C3 465 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 OR56A1Q8NGH5 318 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 FBXO27Q8NI29 283 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 PSMA8Q8TAA3 256 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 AKAP1Q92667 903 aaKnown RBP eCLIP16.7■□□□□ 0.267e-8■■■□□ 15.7
TMEM41A-202ENST00000382227 PPP3R2Q96LZ3 170 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 ACTRT3Q9BYD9 372 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 SRXN1Q9BYN0 137 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 KLHL13Q9P2N7 655 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 ICAM5Q9UMF0 924 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 CARD8Q9Y2G2 431 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 ACTL7BQ9Y614 415 aa16.7■□□□□ 0.26
TMEM41A-202ENST00000382227 JMJD1CQ15652 2540 aa16.69■□□□□ 0.26
TMEM41A-202ENST00000382227 H3BNH8 94 aa16.69■□□□□ 0.26
TMEM41A-202ENST00000382227 OIP5O43482 229 aa16.69■□□□□ 0.26
TMEM41A-202ENST00000382227 NPHS1O60500 1241 aa16.69■□□□□ 0.26
TMEM41A-202ENST00000382227 SOX30O94993 753 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms