RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 HPGDSO60760 199 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 NDUFB2O95178 105 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 TGM6O95932 706 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 CAV2P51636 162 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 TAS2R20P59543 309 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 RPS27AP62979 156 aaKnown RBP13.17□□□□□ -0.3
SNPH-201ENST00000381867 UBA52P62987 128 aaKnown RBP13.17□□□□□ -0.3
SNPH-201ENST00000381867 TATDN3Q17R31 274 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 ZNF551Q7Z340 670 aaPredicted RBP13.17□□□□□ -0.3
SNPH-201ENST00000381867 DNAJC22Q8N4W6 341 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 GTF2H4Q92759 462 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 PITX2Q99697 317 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 DHRS4Q9BTZ2 278 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 SLC46A2Q9BY10 475 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 AGPAT2O15120 278 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 RNH1P13489 461 aaKnown RBP13.17□□□□□ -0.3
SNPH-201ENST00000381867 EIF2DP41214 584 aaKnown RBP13.17□□□□□ -0.3
SNPH-201ENST00000381867 CASP3P42574 277 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 TNFRSF4P43489 277 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 MAP4K2Q12851 820 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 PRDM9Q9NQV7 894 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 OR6C2Q9NZP2 312 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 PPP4R1LQ9P1A2 415 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 IL20RAQ9UHF4 553 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 ARNTLO00327 626 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 FBLP22087 321 aaKnown RBP13.17□□□□□ -0.3
SNPH-201ENST00000381867 SGPP2Q8IWX5 399 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 R3HDMLQ9H3Y0 253 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 TBX21Q9UL17 535 aa13.17□□□□□ -0.3
SNPH-201ENST00000381867 FAM230AA0A1W2PPH8 454 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 BRINP1O60477 761 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 KNG1P01042 644 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 IL1AP01583 271 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 HNRNPA2B1P22626 353 aaKnown RBP13.16□□□□□ -0.3
SNPH-201ENST00000381867 PEA15Q15121 130 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 USP53Q70EK8 1073 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 SIMC1Q8NDZ2 872 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 SLC12A9Q9BXP2 914 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 TUBG2Q9NRH3 451 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 ATG4BQ9Y4P1 393 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 B3GALT1Q9Y5Z6 326 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 MYH7BA7E2Y1 1941 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 SGCEO43556 437 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 CNOT4O95628 575 aaKnown RBP13.16□□□□□ -0.3
SNPH-201ENST00000381867 SLC2A5P22732 501 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 CTXN1P60606 82 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 ZC3H14Q6PJT7 736 aaKnown RBP13.16□□□□□ -0.3
SNPH-201ENST00000381867 ELP4Q96EB1 424 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 ZNF587Q96SQ5 575 aaPredicted RBP13.16□□□□□ -0.3
SNPH-201ENST00000381867 NPAP1Q9NZP6 1156 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 CNIH4Q9P003 139 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 LINC01553A4QN01 128 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 IGLON5A6NGN9 336 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 M0R3H8 397 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 GFRA2O00451 464 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 RNASET2O00584 256 aaKnown RBP13.16□□□□□ -0.3
SNPH-201ENST00000381867 UGDHO60701 494 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 CRTC1Q6UUV9 634 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 KDELC1Q6UW63 502 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 LRRC28Q86X40 367 aaPredicted RBP13.16□□□□□ -0.3
SNPH-201ENST00000381867 METTL4Q8N3J2 472 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 SYNPRQ8TBG9 265 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 GPR148Q8TDV2 347 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 PRRT1Q99946 306 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 DPH1Q9BZG8 443 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 ACTR10Q9NZ32 417 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 VAPAQ9P0L0 249 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 PCDHA9Q9Y5H5 950 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 HSBP1L1C9JCN9 74 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 GIFP27352 417 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 RAB5CP51148 216 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 PIN1Q13526 163 aaPredicted RBP13.16□□□□□ -0.3
SNPH-201ENST00000381867 MEF2DQ14814 521 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 SVBPQ8N300 66 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 ADAMTS14Q8WXS8 1223 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 MYLIPQ8WY64 445 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 DAZLQ92904 295 aaKnown RBP13.16□□□□□ -0.3
SNPH-201ENST00000381867 MUL1Q969V5 352 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 DNTTIP1Q9H147 329 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 WBP1LQ9NX94 342 aa13.16□□□□□ -0.3
SNPH-201ENST00000381867 GMDSO60547 372 aa13.15□□□□□ -0.3
SNPH-201ENST00000381867 GAAP10253 952 aa13.15□□□□□ -0.3
SNPH-201ENST00000381867 SSTR2P30874 369 aa13.15□□□□□ -0.3
SNPH-201ENST00000381867 PRPS1P60891 318 aa13.15□□□□□ -0.3
SNPH-201ENST00000381867 RPS15P62841 145 aaKnown RBP13.15□□□□□ -0.3
SNPH-201ENST00000381867 PAQR9Q6ZVX9 377 aa13.15□□□□□ -0.3
SNPH-201ENST00000381867 MFSD6LQ8IWD5 586 aa13.15□□□□□ -0.3
SNPH-201ENST00000381867 OR5H6Q8NGV6 325 aa13.15□□□□□ -0.3
SNPH-201ENST00000381867 SPPL3Q8TCT6 385 aa13.15□□□□□ -0.3
SNPH-201ENST00000381867 THAP3Q8WTV1 239 aaPredicted RBP13.15□□□□□ -0.3
SNPH-201ENST00000381867 DNAJA3Q96EY1 480 aa13.15□□□□□ -0.3
SNPH-201ENST00000381867 PINK1Q9BXM7 581 aa13.15□□□□□ -0.3
SNPH-201ENST00000381867 NOX3Q9HBY0 568 aa13.15□□□□□ -0.3
SNPH-201ENST00000381867 OIP5O43482 229 aa13.15□□□□□ -0.3
SNPH-201ENST00000381867 SYT7O43581 403 aa13.15□□□□□ -0.3
SNPH-201ENST00000381867 BPIP17213 487 aa13.15□□□□□ -0.3
SNPH-201ENST00000381867 FOXA1P55317 472 aa13.15□□□□□ -0.3
SNPH-201ENST00000381867 MALLQ13021 153 aa13.15□□□□□ -0.3
SNPH-201ENST00000381867 LPAL2Q16609 132 aa13.15□□□□□ -0.3
SNPH-201ENST00000381867 SFXN5Q8TD22 340 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms