RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 NTMT1Q9BV86 223 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 PPIL3Q9H2H8 161 aaKnown RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 HIVEP2P31629 2446 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 TRAV1-2A0A0B4J238 106 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 KHNYNO15037 678 aaKnown RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 MC4RP32245 332 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 MAGEB1P43366 347 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 WNT3AP56704 352 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 WDR5P61964 334 aaKnown RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 MAT1AQ00266 395 aaKnown RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 P2RY14Q15391 338 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 LRRC26Q2I0M4 334 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 FAM74A3Q4VXF1 159 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 PPP1R26Q5T8A7 1209 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 ARHGAP40Q5TG30 622 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 ABHD15Q6UXT9 468 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 CD300LDQ6UXZ3 194 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 RBMS3Q6XE24 437 aaKnown RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 GRASPQ7Z6J2 395 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 ACBD7Q8N6N7 88 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 YIPF7Q8N8F6 280 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 ANKLE1Q8NAG6 615 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 GLYATL1Q969I3 302 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 PHF21BQ96EK2 531 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 C12orf42Q96LP6 360 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 MYADMQ96S97 322 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 MRPL45Q9BRJ2 306 aaKnown RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 VPS29Q9UBQ0 182 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 FTSJ1Q9UET6 329 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 FNDC1Q4ZHG4 1894 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 SNCGO76070 127 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 IFNA5P01569 189 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 PTHLHP12272 177 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 TNFSF9P41273 254 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 ASPAP45381 313 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 MTCP1P56278 107 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 RNASE10Q5GAN6 216 aaKnown RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 TEX261Q6UWH6 196 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 OVCH1Q7RTY7 1134 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 LIMS2Q7Z4I7 341 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 OR5AP2Q8NGF4 316 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 MAL2Q969L2 176 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 ABHD14BQ96IU4 210 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 TREM1Q9NP99 234 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 HSFX1Q9UBD0 423 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 RBPJLQ9UBG7 517 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 ZNF490Q9ULM2 529 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 PCDHGA8Q9Y5G5 932 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 U3KQ87 197 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 SHANK1Q9Y566 2161 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 ADAMTSL1Q8N6G6 1762 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 CTDSPLO15194 276 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 BEST1O76090 585 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 RAB3DO95716 219 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 PIRTP0C851 137 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 GBE1Q04446 702 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 CNIH2Q6PI25 160 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 THOC6Q86W42 341 aaKnown RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 SIDT2Q8NBJ9 832 aaKnown RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 TMEM104Q8NE00 496 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 CRYGNQ8WXF5 182 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 MFRPQ9BY79 579 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 FN3KRPQ9HA64 309 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 PDE7BQ9NP56 450 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 B3GAT2Q9NPZ5 323 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 TDP1Q9NUW8 608 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 NDRG4Q9ULP0 352 aaKnown RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 GPR34Q9UPC5 381 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 G3V3Q6 166 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 HLA-DQB1P01920 261 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 OR3A2P47893 321 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 ERFP50548 548 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 KCNQ1P51787 676 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 CDH12P55289 794 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 NAAAQ02083 359 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 TEAD2Q15562 447 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 TOR2AQ5JU69 321 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 PPP1R3BQ86XI6 285 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 NANPQ8TBE9 248 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 ADAMTS15Q8TE58 950 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 SYT3Q9BQG1 590 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 CCM2Q9BSQ5 444 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 THAP7Q9BT49 309 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 CHRDL1Q9BU40 450 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 PINK1Q9BXM7 581 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 OR11A1Q9GZK7 315 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 ENPP4Q9Y6X5 453 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 PCDH7O60245 1069 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 THEGLP0DJG4 465 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 AFF3P51826 1226 aaKnown RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 SF3B4Q15427 424 aaKnown RBP eCLIP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 EXOSC6Q5RKV6 272 aaKnown RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 TRMT10BQ6PF06 316 aaKnown RBP4.61□□□□□ -1.67
PTPRD-203ENST00000381196 UMODL1-AS1Q8N2C9 162 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 ASB12Q8WXK4 309 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 RAB24Q969Q5 203 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 ORAI1Q96D31 301 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 TECTBQ96PL2 329 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 G6PC3Q9BUM1 346 aa4.61□□□□□ -1.67
PTPRD-203ENST00000381196 KCNJ16Q9NPI9 418 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms