RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 PCP4L1A6NKN8 68 aa13.26□□□□□ -0.29
CLCN4-201ENST00000380829 CPSF4LA6NMK7 179 aaKnown RBP13.26□□□□□ -0.29
CLCN4-201ENST00000380829 I3L1I5 382 aaPredicted RBP13.26□□□□□ -0.29
CLCN4-201ENST00000380829 ATP1B1P05026 303 aa13.26□□□□□ -0.29
CLCN4-201ENST00000380829 PROS1P07225 676 aa13.26□□□□□ -0.29
CLCN4-201ENST00000380829 STSP08842 583 aa13.26□□□□□ -0.29
CLCN4-201ENST00000380829 CT62P0C5K7 136 aa13.26□□□□□ -0.29
CLCN4-201ENST00000380829 PRKACAP17612 351 aa13.26□□□□□ -0.29
CLCN4-201ENST00000380829 RPS5P46782 204 aaKnown RBP13.26□□□□□ -0.29
CLCN4-201ENST00000380829 FASLGP48023 281 aa13.26□□□□□ -0.29
CLCN4-201ENST00000380829 GZMKP49863 264 aa13.26□□□□□ -0.29
CLCN4-201ENST00000380829 STARD6P59095 220 aa13.26□□□□□ -0.29
CLCN4-201ENST00000380829 TAS2R41P59536 307 aa13.26□□□□□ -0.29
CLCN4-201ENST00000380829 CTAG1AP78358 180 aa13.26□□□□□ -0.29
CLCN4-201ENST00000380829 FHL5Q5TD97 284 aa13.26□□□□□ -0.29
CLCN4-201ENST00000380829 Q7L0L9 218 aa13.26□□□□□ -0.29
CLCN4-201ENST00000380829 OR4K5Q8NGD3 323 aa13.26□□□□□ -0.29
CLCN4-201ENST00000380829 GGHQ92820 318 aa13.26□□□□□ -0.29
CLCN4-201ENST00000380829 AIFM2Q9BRQ8 373 aa13.26□□□□□ -0.29
CLCN4-201ENST00000380829 C11orf54Q9H0W9 315 aaPredicted RBP13.26□□□□□ -0.29
CLCN4-201ENST00000380829 C19orf53Q9UNZ5 99 aaPredicted RBP13.26□□□□□ -0.29
CLCN4-201ENST00000380829 COLQQ9Y215 455 aaPredicted RBP13.26□□□□□ -0.29
CLCN4-201ENST00000380829 NTNG1Q9Y2I2 539 aa13.26□□□□□ -0.29
CLCN4-201ENST00000380829 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 CENPVL1A0A0U1RR11 272 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 CIB4A0PJX0 185 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 CLCA1A8K7I4 914 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 CDC123O75794 336 aaPredicted RBP13.25□□□□□ -0.29
CLCN4-201ENST00000380829 ZNF250P15622 560 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 CSNK1EP49674 416 aaKnown RBP13.25□□□□□ -0.29
CLCN4-201ENST00000380829 CSNK2BP67870 215 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 LAMTOR1Q6IAA8 161 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 TYW3Q6IPR3 259 aaKnown RBP13.25□□□□□ -0.29
CLCN4-201ENST00000380829 PTCHD4Q6ZW05 846 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 ZER1Q7Z7L7 766 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 ANKRD9Q96BM1 317 aaPredicted RBP13.25□□□□□ -0.29
CLCN4-201ENST00000380829 IL4I1Q96RQ9 567 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 HCN3Q9P1Z3 774 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 TRAPPC4Q9Y296 219 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 WDR45Q9Y484 360 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 SPAG17Q6Q759 2223 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 I3L521 148 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 CHST10O43529 356 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 TNNI3P19429 210 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 BCKDHBP21953 392 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 MMP11P24347 488 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 TRHRP34981 398 aaPredicted RBP13.25□□□□□ -0.29
CLCN4-201ENST00000380829 RNF144AP50876 292 aaPredicted RBP13.25□□□□□ -0.29
CLCN4-201ENST00000380829 LIMK1P53667 647 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 GFERP55789 205 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 GPR68Q15743 365 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 PRICKLE4Q2TBC4 344 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 DGAT2L6Q6ZPD8 337 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 ARHGEF39Q8N4T4 335 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 CAMKK1Q8N5S9 505 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 MORN4Q8NDC4 146 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 NLGN4YQ8NFZ3 816 aaPredicted RBP13.25□□□□□ -0.29
CLCN4-201ENST00000380829 CADM4Q8NFZ8 388 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 PCNPQ8WW12 178 aaKnown RBP13.25□□□□□ -0.29
CLCN4-201ENST00000380829 TGM7Q96PF1 710 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 GPA33Q99795 319 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 ARHGDIGQ99819 225 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 BARHL1Q9BZE3 327 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 CAPN10Q9HC96 672 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 PRDM9Q9NQV7 894 aa13.25□□□□□ -0.29
CLCN4-201ENST00000380829 SYT5O00445 386 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 MTRF1O75570 445 aaKnown RBP13.24□□□□□ -0.29
CLCN4-201ENST00000380829 PDGFAP04085 211 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 RAB38P57729 211 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 ILKQ13418 452 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 ARHGAP11BQ3KRB8 267 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 PRPF38BQ5VTL8 546 aaKnown RBP13.24□□□□□ -0.29
CLCN4-201ENST00000380829 PLCZ1Q86YW0 608 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 IQCF1Q8N6M8 205 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 FRMD6Q96NE9 622 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 OR5M11Q96RB7 305 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 SDF2Q99470 211 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 SRRQ9GZT4 340 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 SLC22A4Q9H015 551 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 PLCXD1Q9NUJ7 323 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 FBXO34Q9NWN3 711 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 EIF3KQ9UBQ5 218 aaKnown RBP13.24□□□□□ -0.29
CLCN4-201ENST00000380829 WNT16Q9UBV4 365 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 ZNF443Q9Y2A4 671 aaPredicted RBP13.24□□□□□ -0.29
CLCN4-201ENST00000380829 TEX51A0A1B0GUA7 166 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 TSPAN4O14817 238 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 CDK1P06493 297 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 PRKAR1BP31321 381 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 SSTR4P31391 388 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 CSTF2P33240 577 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLCN4-201ENST00000380829 MAT1AQ00266 395 aaKnown RBP13.24□□□□□ -0.29
CLCN4-201ENST00000380829 TNK1Q13470 666 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 ZNF267Q14586 743 aaPredicted RBP13.24□□□□□ -0.29
CLCN4-201ENST00000380829 TSTQ16762 297 aaKnown RBP13.24□□□□□ -0.29
CLCN4-201ENST00000380829 NKAIN2Q5VXU1 208 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 ZNF767PQ75MW2 155 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 TCTE3Q8IZS6 198 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 VWA5B2Q8N398 1253 aa13.24□□□□□ -0.29
CLCN4-201ENST00000380829 METTL27Q8N6F8 245 aaPredicted RBP13.24□□□□□ -0.29
CLCN4-201ENST00000380829 MYDGFQ969H8 173 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms