RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 SLC25A30Q5SVS4 291 aa13.89□□□□□ -0.19
SNX2-201ENST00000379516 PRPF38BQ5VTL8 546 aaKnown RBP13.89□□□□□ -0.19
SNX2-201ENST00000379516 YOD1Q5VVQ6 348 aaPredicted RBP13.89□□□□□ -0.19
SNX2-201ENST00000379516 SLC30A6Q6NXT4 461 aa13.89□□□□□ -0.19
SNX2-201ENST00000379516 MRGPREQ86SM8 312 aa13.89□□□□□ -0.19
SNX2-201ENST00000379516 C1orf210Q8IVY1 113 aa13.89□□□□□ -0.19
SNX2-201ENST00000379516 TMEM163Q8TC26 289 aa13.89□□□□□ -0.19
SNX2-201ENST00000379516 EFHD2Q96C19 240 aaPredicted RBP13.89□□□□□ -0.19
SNX2-201ENST00000379516 ZNF582Q96NG8 517 aaPredicted RBP13.89□□□□□ -0.19
SNX2-201ENST00000379516 LMF1Q96S06 567 aa13.89□□□□□ -0.19
SNX2-201ENST00000379516 PRRG3Q9BZD7 231 aa13.89□□□□□ -0.19
SNX2-201ENST00000379516 SYNDIG1Q9H7V2 258 aa13.89□□□□□ -0.19
SNX2-201ENST00000379516 C20orf141Q9NUB4 165 aa13.89□□□□□ -0.19
SNX2-201ENST00000379516 FLRT3Q9NZU0 649 aa13.89□□□□□ -0.19
SNX2-201ENST00000379516 ZNF223Q9UK11 482 aaPredicted RBP13.89□□□□□ -0.19
SNX2-201ENST00000379516 SLC22A1O15245 554 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 RPLP0P05388 317 aaKnown RBP13.88□□□□□ -0.19
SNX2-201ENST00000379516 RORAP35398 523 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 EFNA3P52797 238 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 NCF4Q15080 339 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 MED22Q15528 200 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 NSDHLQ15738 373 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 ARMCX4Q5H9R4 360 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 ZBTB46Q86UZ6 589 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 EID2Q8N6I1 236 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 ZSCAN1Q8NBB4 408 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 OR4Q3Q8NH05 313 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 SLC2A12Q8TD20 617 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 FGF11Q92914 225 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 SAMD8Q96LT4 415 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 SLC46A1Q96NT5 459 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 OR5M11Q96RB7 305 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 TEX12Q9BXU0 123 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 ATP13A2Q9NQ11 1180 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 MED31Q9Y3C7 131 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 CDH10Q9Y6N8 788 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 A0A0B4J2E0 115 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 A0A1B0GWA3 101 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 A0A1B0GX12 115 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 A0A1W2PQM1 296 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 TCRBV16S1A1N1A0A5B0 115 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 UNC119BA6NIH7 251 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 CHP2O43745 196 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 FUT1P19526 365 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 MAKP20794 623 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 CSTF2P33240 577 aaKnown RBP eCLIP13.88□□□□□ -0.19
SNX2-201ENST00000379516 PRKCDQ05655 676 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 ELAVL1Q15717 326 aaKnown RBP13.88□□□□□ -0.19
SNX2-201ENST00000379516 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.88□□□□□ -0.19
SNX2-201ENST00000379516 ZSWIM7Q19AV6 140 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 ZNF367Q7RTV3 350 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 ZNF550Q7Z398 422 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 CDK20Q8IZL9 346 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 TBC1D15Q8TC07 691 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 RPL3LQ92901 407 aaKnown RBP13.88□□□□□ -0.19
SNX2-201ENST00000379516 TRIM2Q9C040 744 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 SIDT1Q9NXL6 827 aaKnown RBP13.88□□□□□ -0.19
SNX2-201ENST00000379516 MKL2Q9ULH7 1088 aa13.88□□□□□ -0.19
SNX2-201ENST00000379516 UNC13CQ8NB66 2214 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 ARID1BQ8NFD5 2236 aaPredicted RBP13.87□□□□□ -0.19
SNX2-201ENST00000379516 SPEGQ15772 3267 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 SYNDIG1LA6NDD5 238 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 SERINC4A6NH21 518 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 POLR1CO15160 346 aaPredicted RBP13.87□□□□□ -0.19
SNX2-201ENST00000379516 DDAH2O95865 285 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 CSTAP01040 98 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 PPICP45877 212 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 NCS1P62166 190 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 ACY1Q03154 408 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 SQSTM1Q13501 440 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 PGGHGQ32M88 737 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 NDUFAF6Q330K2 333 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 HSDL2Q6YN16 418 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 LAPTM4BQ86VI4 370 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 SLC34A3Q8N130 599 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 CYP4Z2PQ8N1L4 340 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 CADM2Q8N3J6 435 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 OR2T33Q8NG76 320 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 OR2I1PQ8NGU4 316 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 NDNFQ8TB73 568 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 BPIFA2Q96DR5 249 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 HS6ST2Q96MM7 605 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 NXF5Q9H1B4 397 aaKnown RBP13.87□□□□□ -0.19
SNX2-201ENST00000379516 CFL2Q9Y281 166 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 ERGIC3Q9Y282 383 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 CACNA1EQ15878 2313 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 M0R3G1 203 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 SURF4O15260 269 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 IGKV3-11P04433 115 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 CKMT1AP12532 417 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 ALG10BQ5I7T1 473 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 SLC46A3Q7Z3Q1 461 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 CMIPQ8IY22 773 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 CLDN22Q8N7P3 220 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 LSMEM1Q8N8F7 131 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 FAM181AQ8N9Y4 354 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 ANKK1Q8NFD2 765 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 ZNF721Q8TF20 911 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 SLC35B4Q969S0 331 aa13.87□□□□□ -0.19
SNX2-201ENST00000379516 LGALS12Q96DT0 336 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms