RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 DCDC2BA2VCK2 349 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 PBX2P40425 430 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 ARF3P61204 181 aaPredicted RBP16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 ERVK-25P63136 954 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 ARF1P84077 181 aaKnown RBP16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 TAP2Q03519 686 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 GGTA1PQ4G0N0 100 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 OR9A4Q8NGU2 314 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 SYT3Q9BQG1 590 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 UBQLN4Q9NRR5 601 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 UBQLN2Q9UHD9 624 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 CBLCQ9ULV8 474 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 TMEM246Q9BRR3 403 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 CXCL16Q9H2A7 254 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 R3HDMLQ9H3Y0 253 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 ZNF160Q9HCG1 818 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 INIPQ9NRY2 104 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 FAM86C1Q9NVL1 165 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 CXXC1Q9P0U4 656 aaPredicted RBP16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 PCDHGA8Q9Y5G5 932 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 MYH9P35579 1960 aaKnown RBP16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 BLACEA4D250 179 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 CHMP24386 653 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 PIP5KL1Q5T9C9 394 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 TANGO2Q6ICL3 276 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 SLC15A4Q8N697 577 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 EVA1AQ9H8M9 152 aa16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 DDX60Q8IY21 1712 aaKnown RBP16.7■□□□□ 0.26
CNTNAP3-204ENST00000377656 F5H5K5 113 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 H0YGG7 62 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 PTTG1O95997 202 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 IFNA2P01563 188 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 CD63P08962 238 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 SLC2A5P22732 501 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 LSSP48449 732 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 OR7A5Q15622 319 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 PODNL1Q6PEZ8 512 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 DNAAF1Q8NEP3 725 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 INTS14Q96SY0 518 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 CCDC86Q9H6F5 360 aaKnown RBP16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 ACAD8Q9UKU7 415 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 CA5BQ9Y2D0 317 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 AHDC1Q5TGY3 1603 aaPredicted RBP16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 EEF1E1-BLOC1S5C9J1V9 151 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 IMPA1P29218 277 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 CD40LGP29965 261 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 KCNJ10P78508 379 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 RHEBQ15382 184 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 IGFN1Q86VF2 1251 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 MEX3DQ86XN8 651 aaKnown RBP16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 CCL26Q9Y258 94 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 AK6Q9Y3D8 172 aaKnown RBP16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 DRD5P21918 477 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 HTR3AP46098 478 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 CLEC14AQ86T13 490 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 PPP1R3BQ86XI6 285 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 SPARTQ8N0X7 666 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 LSM14AQ8ND56 463 aaKnown RBP16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 RRNAD1Q96FB5 475 aaKnown RBP16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 HTR3BO95264 441 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 ARAFP10398 606 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 IFNGR1P15260 489 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 AKR1C2P52895 323 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 CDKN3Q16667 212 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 PGM2L1Q6PCE3 622 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 GSG1LQ6UXU4 331 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 ARRDC3Q96B67 414 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 ZNF587Q96SQ5 575 aaPredicted RBP16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 MRI1Q9BV20 369 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 DDX31Q9H8H2 851 aaKnown RBP16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 SYNPO2LQ9H987 977 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 PRSS16Q9NQE7 514 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 PAQR5Q9NXK6 330 aaPredicted RBP16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 SLAMF8Q9P0V8 285 aa16.69■□□□□ 0.26
CNTNAP3-204ENST00000377656 H3BMQ9 156 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 ZNF701M0R085 212 aaPredicted RBP16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 TACR1P25103 407 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 CA5AP35218 305 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 CXCR4P61073 352 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 MELKQ14680 651 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 RCBTB1Q8NDN9 531 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 COG8Q96MW5 612 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 PLEK2Q9NYT0 353 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 TMX2-CTNND1H3BSU7 103 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 ZFAND5O76080 213 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 MPIG6BO95866 241 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 ENTPD8Q5MY95 495 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 FAM83HQ6ZRV2 1179 aaPredicted RBP16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 TREX2Q9BQ50 279 aaPredicted RBP16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 C20orf27Q9GZN8 174 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 CNOT2Q9NZN8 540 aaKnown RBP16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 LRP5O75197 1615 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 RAD1O60671 282 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 VRK2Q86Y07 508 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 MCTS1Q9ULC4 181 aaKnown RBP16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 AIFM1O95831 613 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 ADH6P28332 368 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 DCAF7P61962 342 aa16.68■□□□□ 0.26
CNTNAP3-204ENST00000377656 WBP2NLQ6ICG8 309 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms