RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 RNLSQ5VYX0 342 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 SAXO2Q658L1 398 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 OR51Q1Q8NH59 317 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 NT5CQ8TCD5 201 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 PROX1Q92786 737 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 SMIM10Q96HG1 83 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 DHRS1Q96LJ7 313 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 Q96MT0 163 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 NIPSNAP1Q9BPW8 284 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 SLC6A16Q9GZN6 736 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 NT5DC2Q9H857 520 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 MIEF1Q9NQG6 463 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 CLN6Q9NWW5 311 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 LUZP4Q9P127 313 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 MKLN1Q9UL63 735 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 CFL2Q9Y281 166 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 CSAG2Q9Y5P2 127 aa11.46□□□□□ -0.57
VRK3-202ENST00000377011 PRAMEF25A6NGN4 478 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 IDSB3KWA1 339 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 FAM227AF5H4B4 570 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 GALR3O60755 368 aaPredicted RBP11.46□□□□□ -0.58
VRK3-202ENST00000377011 NSA2O95478 260 aaKnown RBP11.46□□□□□ -0.58
VRK3-202ENST00000377011 PLA2G2AP14555 144 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 DDCP20711 480 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 SOX6P35712 828 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 SLC15A1P46059 708 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 CRISP1P54107 249 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 SMIM11AP58511 58 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 C19orf57Q0VDD7 668 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 ST3GAL4Q11206 333 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 ARMCX4Q5H9R4 360 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 TMEM201Q5SNT2 666 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 ZNF770Q6IQ21 691 aaPredicted RBP11.46□□□□□ -0.58
VRK3-202ENST00000377011 TMIGD1Q6UXZ0 262 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 GDPGP1Q6ZNW5 385 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 RAB43Q86YS6 212 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 CAMKVQ8NCB2 501 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 HPS1Q92902 700 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 CIDECQ96AQ7 238 aaPredicted RBP11.46□□□□□ -0.58
VRK3-202ENST00000377011 PEX11GQ96HA9 241 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 VN1R1Q9GZP7 353 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 OR51B5Q9H339 312 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 MOV10Q9HCE1 1003 aaKnown RBP11.46□□□□□ -0.58
VRK3-202ENST00000377011 LANCL2Q9NS86 450 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 RLIMQ9NVW2 624 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 GPR83Q9NYM4 423 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 ZNF229Q9UJW7 825 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.46□□□□□ -0.58
VRK3-202ENST00000377011 MGAT4BQ9UQ53 548 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 MAP4K5Q9Y4K4 846 aa11.46□□□□□ -0.58
VRK3-202ENST00000377011 TGFB1P01137 390 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 KLK1P06870 262 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 IL3P08700 152 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 STSP08842 583 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 COX6A1P12074 109 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 CHMP24386 653 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 SOAT1P35610 550 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 FRKP42685 505 aaPredicted RBP11.45□□□□□ -0.58
VRK3-202ENST00000377011 OR1E2P47887 323 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 UGT2B15P54855 530 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 RHAGQ02094 409 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 PTGES3Q15185 160 aaKnown RBP11.45□□□□□ -0.58
VRK3-202ENST00000377011 NDUFA5Q16718 116 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 Q6ZPB1 254 aaPredicted RBP11.45□□□□□ -0.58
VRK3-202ENST00000377011 ASB18Q6ZVZ8 466 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 UBE3DQ7Z6J8 389 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 LYSMD2Q8IV50 215 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 TAGAPQ8N103 731 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 AQP11Q8NBQ7 271 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 TMEM52Q8NDY8 209 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 TSLPQ969D9 159 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 MVB12AQ96EY5 273 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 C17orf62Q9BQA9 187 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 AIF1LQ9BQI0 150 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 SORBS1Q9BX66 1292 aaKnown RBP11.45□□□□□ -0.58
VRK3-202ENST00000377011 MFRPQ9BY79 579 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 ZNF552Q9H707 407 aaPredicted RBP11.45□□□□□ -0.58
VRK3-202ENST00000377011 ZNF160Q9HCG1 818 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 TUBD1Q9UJT1 453 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 ADAM29Q9UKF5 820 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 MKL2Q9ULH7 1088 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 TMCC3Q9ULS5 477 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 IFT52Q9Y366 437 aa11.45□□□□□ -0.58
VRK3-202ENST00000377011 UTP20O75691 2785 aaKnown RBP11.44□□□□□ -0.58
VRK3-202ENST00000377011 A0A075B6Q4 140 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 C5orf58C9J3I9 102 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 LOC110117498-PIK3R3F6TDL0 507 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 FAAHO00519 579 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 CHST10O43529 356 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 SLITRK5O94991 958 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 SLC35G6P0C7Q6 338 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 OSMP13725 252 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 ALOX12P18054 663 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 ENDOUP21128 410 aaKnown RBP11.44□□□□□ -0.58
VRK3-202ENST00000377011 AHRP35869 848 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 EMP2P54851 167 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 BTG2P78543 158 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 RUNX2Q13950 521 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 HEPACAMQ14CZ8 416 aa11.44□□□□□ -0.58
VRK3-202ENST00000377011 MLC1Q15049 377 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms