RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 HRKO00198 91 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 LIMS3P0CW19 117 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 LIMS4P0CW20 117 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 SAGP10523 405 aaPredicted RBP18.71■□□□□ 0.59
VSX1-202ENST00000376709 DRD5P21918 477 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 ZNF181Q2M3W8 571 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 AMZ1Q400G9 498 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 SMARCD3Q6STE5 483 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 LHFPL3Q86UP9 236 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 SIX5Q8N196 739 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 METTL27Q8N6F8 245 aaPredicted RBP18.71■□□□□ 0.59
VSX1-202ENST00000376709 TM9SF4Q92544 642 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 BPIFA2Q96DR5 249 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 MMABQ96EY8 250 aaPredicted RBP18.71■□□□□ 0.59
VSX1-202ENST00000376709 TGM7Q96PF1 710 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 COLQQ9Y215 455 aaPredicted RBP18.71■□□□□ 0.59
VSX1-202ENST00000376709 SYNDIG1LA6NDD5 238 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 LILRA5A6NI73 299 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 FAM183AA6NL82 134 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 LYPD3O95274 346 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 NSA2O95478 260 aaKnown RBP18.71■□□□□ 0.59
VSX1-202ENST00000376709 ZGLP1P0C6A0 271 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 ATXN8OSP0DMR3 200 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 HTR1FP30939 366 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 SLC1A3P43003 542 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 CD97P48960 835 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 RORCP51449 518 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 BNC1Q01954 994 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 PLAURQ03405 335 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 DSG2Q14126 1118 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 FAM53BQ14153 422 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 ZNF267Q14586 743 aaPredicted RBP18.71■□□□□ 0.59
VSX1-202ENST00000376709 ZNF613Q6PF04 617 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 CXXC5Q7LFL8 322 aaKnown RBP18.71■□□□□ 0.59
VSX1-202ENST00000376709 BMP8AQ7Z5Y6 402 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 LYSMD2Q8IV50 215 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 CPOQ8IVL8 374 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 ADAMTS18Q8TE60 1221 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 UFD1Q92890 307 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 TPK1Q9H3S4 243 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 UCK1Q9HA47 277 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 HINT3Q9NQE9 182 aaKnown RBP18.71■□□□□ 0.59
VSX1-202ENST00000376709 TXNL4BQ9NX01 149 aaKnown RBP18.71■□□□□ 0.59
VSX1-202ENST00000376709 CBLCQ9ULV8 474 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 TMEM5Q9Y2B1 443 aa18.71■□□□□ 0.59
VSX1-202ENST00000376709 A0A075B6Q4 140 aa18.7■□□□□ 0.58
VSX1-202ENST00000376709 ISPDA4D126 451 aa18.7■□□□□ 0.58
VSX1-202ENST00000376709 BLACEA4D250 179 aa18.7■□□□□ 0.58
VSX1-202ENST00000376709 OR2W5A6NFC9 320 aa18.7■□□□□ 0.58
VSX1-202ENST00000376709 CTDSP2O14595 271 aa18.7■□□□□ 0.58
VSX1-202ENST00000376709 RGS5O15539 181 aa18.7■□□□□ 0.58
VSX1-202ENST00000376709 HRO43593 1189 aa18.7■□□□□ 0.58
VSX1-202ENST00000376709 STARD6P59095 220 aa18.7■□□□□ 0.58
VSX1-202ENST00000376709 RACK1P63244 317 aaKnown RBP18.7■□□□□ 0.58
VSX1-202ENST00000376709 BTG2P78543 158 aa18.7■□□□□ 0.58
VSX1-202ENST00000376709 RPL6Q02878 288 aaKnown RBP18.7■□□□□ 0.58
VSX1-202ENST00000376709 FAM83FQ8NEG4 500 aaPredicted RBP18.7■□□□□ 0.58
VSX1-202ENST00000376709 OR6C4Q8NGE1 309 aa18.7■□□□□ 0.58
VSX1-202ENST00000376709 VSTM2LQ96N03 204 aa18.7■□□□□ 0.58
VSX1-202ENST00000376709 TOR4AQ9NXH8 423 aa18.7■□□□□ 0.58
VSX1-202ENST00000376709 PLCL2Q9UPR0 1127 aa18.7■□□□□ 0.58
VSX1-202ENST00000376709 DTX4Q9Y2E6 619 aa18.7■□□□□ 0.58
VSX1-202ENST00000376709 STK25O00506 426 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 RCBTB2O95199 551 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 MAOAP21397 527 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 SEPHS1P49903 392 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 PGDP52209 483 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 GFERP55789 205 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 FXYD6P3P58550 94 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 MXD1Q05195 221 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 RUNX1T1Q06455 604 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 DEFB133Q30KQ1 61 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 NACC2Q96BF6 587 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 C1GALT1C1Q96EU7 318 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 PTCHD1Q96NR3 888 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 SMURF1Q9HCE7 757 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 ZNF229Q9UJW7 825 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 SOCS6O14544 535 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 PRAMEF2O60811 474 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 IGKV1D-16P01601 117 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 GTF2E2P29084 291 aaKnown RBP18.69■□□□□ 0.58
VSX1-202ENST00000376709 NNATQ16517 81 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 PLK5Q496M5 336 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 SLC35F1Q5T1Q4 408 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 STEAP3Q658P3 488 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 C22orf42Q6IC83 251 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 RPL13AP3Q6NVV1 102 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 PLBD1Q6P4A8 553 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 OR13C2Q8NGS9 318 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 HSPA12BQ96MM6 686 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 PHOX2BQ99453 314 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 ARHGAP9Q9BRR9 750 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 BARHL1Q9BZE3 327 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 EVA1AQ9H8M9 152 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 Q9N2J8 555 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 ISYNA1Q9NPH2 558 aa18.69■□□□□ 0.58
VSX1-202ENST00000376709 A0A0B4J2E0 115 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 A0A1B0GX12 115 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 SLC30A4O14863 429 aa18.68■□□□□ 0.58
VSX1-202ENST00000376709 PLD2O14939 933 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms