RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 OR2T33Q8NG76 320 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 OR10H4Q8NGA5 316 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 OR9A2Q8NGT5 310 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 OR5W2Q8NH69 310 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 TRMT10AQ8TBZ6 339 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 FGF14Q92915 247 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 SLC41A3Q96GZ6 507 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 ZFP3Q96NJ6 502 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 LGR4Q9BXB1 951 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 KCNN2Q9H2S1 579 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 PRO3102Q9H379 93 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 C6orf106Q9H6K1 298 aaPredicted RBP13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 KLHL1Q9NR64 748 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 MARK1Q9P0L2 795 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 LINC00862A6NCI5 91 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 I3L521 148 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 KLF4O43474 513 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 FZD7O75084 574 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 MRPL3P09001 348 aaKnown RBP13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 ERGP11308 486 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 NDUFV2P19404 249 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 NPR2P20594 1047 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 IGFBP4P22692 258 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 ACVR1BP36896 505 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 PDX1P52945 283 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 SLC9A5Q14940 896 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 AGERQ15109 404 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 LTB4RQ15722 352 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 ESPNLQ6ZVH7 1005 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 SIAH3Q8IW03 269 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 SPERTQ8NA61 448 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 DACT3Q96B18 629 aaPredicted RBP13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 LRIG1Q96JA1 1093 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 TEX12Q9BXU0 123 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 SLC7A7Q9UM01 511 aa13.14□□□□□ -0.31
CLCNKA-202ENST00000375692 DAPL1A0PJW8 107 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 ERI3O43414 337 aaKnown RBP13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 LATO43561 262 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 TPOP07202 933 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 CISD3P0C7P0 127 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 ANXA3P12429 323 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 PAICSP22234 425 aaKnown RBP13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 PRKACBP22694 351 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 SLC16A1P53985 500 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 DGCR2P98153 550 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 RPA4Q13156 261 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 GNA13Q14344 377 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 DECR1Q16698 335 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 GAB4Q2WGN9 574 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 FCRLBQ6BAA4 426 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 IDO2Q6ZQW0 420 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 C17orf47Q8NEP4 570 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 NUP43Q8NFH3 380 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 OR13C5Q8NGS8 318 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 LRRC20Q8TCA0 184 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 NXPE3Q969Y0 559 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 ARSGQ96EG1 525 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 FAIM2Q9BWQ8 316 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 DPAGT1Q9H3H5 408 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 RANBP3Q9H6Z4 567 aaPredicted RBP13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 EMC7Q9NPA0 242 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 GDE1Q9NZC3 331 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 ADAM29Q9UKF5 820 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 SATB2Q9UPW6 733 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 VCANP13611 3396 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 A0A0G2JK05 382 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 B8ZZF3 427 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 PRRT4C9JH25 899 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 SYT5O00445 386 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 SLC9A3R1O14745 358 aaPredicted RBP13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 AIFM1O95831 613 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 ANKRD34CP0C6C1 535 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 RBMS1P29558 406 aaKnown RBP13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 CLCNKAP51800 687 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 RGS1Q08116 209 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 LGALSLQ3ZCW2 172 aaPredicted RBP13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 MBOAT2Q6ZWT7 520 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 C16orf62Q7Z3J2 963 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 ZNF687Q8N1G0 1237 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 OR4D9Q8NGE8 314 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 OTUB2Q96DC9 234 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 ZNF764Q96H86 408 aaPredicted RBP13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 C12orf66Q96MD2 445 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 CACNG6Q9BXT2 260 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 DPH1Q9BZG8 443 aa13.13□□□□□ -0.31
CLCNKA-202ENST00000375692 SYNDIG1LA6NDD5 238 aa13.12□□□□□ -0.31
CLCNKA-202ENST00000375692 VEGFDO43915 354 aa13.12□□□□□ -0.31
CLCNKA-202ENST00000375692 MPC2O95563 127 aa13.12□□□□□ -0.31
CLCNKA-202ENST00000375692 NFATC1O95644 943 aa13.12□□□□□ -0.31
CLCNKA-202ENST00000375692 M6PRP20645 277 aa13.12□□□□□ -0.31
CLCNKA-202ENST00000375692 BCL6P41182 706 aa13.12□□□□□ -0.31
CLCNKA-202ENST00000375692 ANXA11P50995 505 aaKnown RBP13.12□□□□□ -0.31
CLCNKA-202ENST00000375692 ST8SIA6P61647 398 aa13.12□□□□□ -0.31
CLCNKA-202ENST00000375692 ST3GAL2Q16842 350 aa13.12□□□□□ -0.31
CLCNKA-202ENST00000375692 BHLHB9Q6PI77 547 aa13.12□□□□□ -0.31
CLCNKA-202ENST00000375692 TMEM64Q6YI46 380 aa13.12□□□□□ -0.31
CLCNKA-202ENST00000375692 ACOT4Q8N9L9 421 aa13.12□□□□□ -0.31
CLCNKA-202ENST00000375692 ABHD4Q8TB40 342 aa13.12□□□□□ -0.31
CLCNKA-202ENST00000375692 TTTY10Q9BZA0 68 aa13.12□□□□□ -0.31
CLCNKA-202ENST00000375692 MED17Q9NVC6 651 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms