RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 ZNF221Q9UK13 617 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 DAPP1Q9UN19 280 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 PMF1-BGLAPU3KQ54 211 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 ZNF43P17038 809 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 PDX1P52945 283 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 HSF2Q03933 536 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 MESP2Q0VG99 397 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 ZER1Q7Z7L7 766 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 DUSP19Q8WTR2 217 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 SENP5Q96HI0 755 aaPredicted RBP16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 PITX2Q99697 317 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 OR10A5Q9H207 317 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 MMP27Q9H306 513 aa16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 DDX31Q9H8H2 851 aaKnown RBP16.78■□□□□ 0.28
PTPDC1-202ENST00000375360 ACTC1P68032 377 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 ACTA1P68133 377 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 TP53I3Q53FA7 332 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 KLHL26Q53HC5 615 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 NHSL2Q5HYW2 709 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 ULK3Q6PHR2 472 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 PTRH1Q86Y79 214 aaKnown RBP16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 NXPE2Q96DL1 559 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 NEU3Q9UQ49 428 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 G3V3Y1 287 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 BRINP1O60477 761 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 F10P00742 488 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 F13BP05160 661 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 ITIH1P19827 911 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 LIM2P55344 173 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 PRAMEF20Q5VT98 475 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 B3GAT2Q9NPZ5 323 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 TAS2R10Q9NYW0 307 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 MBD1Q9UIS9 605 aaPredicted RBP16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 TMEM14AQ9Y6G1 99 aa16.77■□□□□ 0.28
PTPDC1-202ENST00000375360 TPD52L2O43399 206 aaKnown RBP16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 SIGLEC6O43699 453 aa16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 FARS2O95363 451 aaKnown RBP16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 PLATP00750 562 aa16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 KEAP1Q14145 624 aa16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 TUBA3EQ6PEY2 450 aa16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 TMPRSS12Q86WS5 348 aa16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 GPALPP1Q8IXQ4 340 aa16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 TRUB1Q8WWH5 349 aaKnown RBP16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 OR51E2Q9H255 320 aa16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 GPN1Q9HCN4 374 aaPredicted RBP16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 SYNGR4O95473 234 aa16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 GABARAPL2P60520 117 aa16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 EMX1Q04741 257 aaPredicted RBP16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 SCGB2B2Q4G0G5 96 aa16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 ZNF775Q96BV0 537 aaPredicted RBP16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 MSANTD3Q96H12 275 aa16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 GINS4Q9BRT9 223 aa16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 TEX101Q9BY14 249 aa16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 ENAMQ9NRM1 1142 aa16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 NDUFAF4Q9P032 175 aa16.77■□□□□ 0.27
PTPDC1-202ENST00000375360 SMAD9O15198 467 aaKnown RBP16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 ZNF749O43361 778 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 BCAS1O75363 584 aaPredicted RBP16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 GFERP55789 205 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 PITPNAQ00169 270 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 OR7A5Q15622 319 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 PLAG1Q6DJT9 500 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 FBXO45P0C2W1 286 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 CRHBPP24387 322 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 HMBOX1Q6NT76 420 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 OR13C2Q8NGS9 318 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 CPNE6O95741 557 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 PGAM2P15259 253 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 DRD3P35462 400 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 PAPD4Q6PIY7 484 aaKnown RBP16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 TMEM92Q6UXU6 159 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 ETFBKMTQ8IXQ9 262 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 LAS2Q8IYD9 372 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 ARMC10Q8N2F6 343 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 PMM1Q92871 262 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 NRTNQ99748 197 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 NIPSNAP1Q9BPW8 284 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 RBM24Q9BX46 236 aaKnown RBP16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 NPLQ9BXD5 320 aaPredicted RBP16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 SLC22A4Q9H015 551 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 B4GALT7Q9UBV7 327 aa16.76■□□□□ 0.27
PTPDC1-202ENST00000375360 PLXNB2O15031 1838 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 NSG1A0A0A6YYJ2 146 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 C2orf72A6NCS6 295 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 MFSD12Q6NUT3 480 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 SFXN2Q96NB2 322 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 PIGUQ9H490 435 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 ERVK13-1Q9NX77 482 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 UPB1Q9UBR1 384 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 CMAHPQ9Y471 501 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 ZFAND5O76080 213 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 TFAP2AP05549 437 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 TFF2Q03403 129 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 DMPKQ09013 629 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 SQSTM1Q13501 440 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 ANKRD34AQ69YU3 496 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 QSOX2Q6ZRP7 698 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 OR4F15Q8NGB8 312 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 FAM174AQ8TBP5 190 aa16.75■□□□□ 0.27
PTPDC1-202ENST00000375360 SH2B3Q9UQQ2 575 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms