RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 B2RBV5 119 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 GTPBP1O00178 669 aaKnown RBP13.65□□□□□ -0.22
HSPG2-201ENST00000374673 HCRTR2O43614 444 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 DNAJA2O60884 412 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 WISP2O76076 250 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 PDE9AO76083 593 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 CPOXP36551 454 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 RNF144AP50876 292 aaPredicted RBP13.65□□□□□ -0.22
HSPG2-201ENST00000374673 EEF1A1P68104 462 aaKnown RBP13.65□□□□□ -0.22
HSPG2-201ENST00000374673 PLAURQ03405 335 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 LIPEQ05469 1076 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 SKP2Q13309 424 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 LARS2Q15031 903 aaKnown RBP13.65□□□□□ -0.22
HSPG2-201ENST00000374673 ZSWIM7Q19AV6 140 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 MRPL2Q5T653 305 aaKnown RBP13.65□□□□□ -0.22
HSPG2-201ENST00000374673 RNF220Q5VTB9 566 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 CBLN3Q6UW01 205 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 ZNF836Q6ZNA1 936 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 CCDC80Q76M96 950 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 VRK2Q86Y07 508 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 MICU2Q8IYU8 434 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 GHDCQ8N2G8 530 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 RBM15BQ8NDT2 890 aaKnown RBP13.65□□□□□ -0.22
HSPG2-201ENST00000374673 ST6GALNAC3Q8NDV1 305 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 FAM83FQ8NEG4 500 aaPredicted RBP13.65□□□□□ -0.22
HSPG2-201ENST00000374673 C1GALT1C1Q96EU7 318 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 SH3YL1Q96HL8 342 aaPredicted RBP13.65□□□□□ -0.22
HSPG2-201ENST00000374673 ZNF607Q96SK3 696 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 LAT2Q9GZY6 243 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 C1orf21Q9H246 121 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 EXOSC3Q9NQT5 275 aaKnown RBP13.65□□□□□ -0.22
HSPG2-201ENST00000374673 SEC14L3Q9UDX4 400 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 DKKL1Q9UK85 242 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 ZNF232Q9UNY5 417 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 USP22Q9UPT9 525 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 LIPGQ9Y5X9 500 aa13.65□□□□□ -0.22
HSPG2-201ENST00000374673 A0A1B0GVC2 190 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 ELOVL7A1L3X0 281 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 CDHR4A6H8M9 788 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 ANKUB1A6NFN9 424 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 CLDN24A6NM45 220 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 OIP5O43482 229 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 SUSD5O60279 629 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 HCN1O60741 890 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 GCM2O75603 506 aaPredicted RBP13.64□□□□□ -0.23
HSPG2-201ENST00000374673 SERPINB7O75635 380 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 TRAPPC6AO75865 159 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 UBTFL6P0CB48 400 aaPredicted RBP13.64□□□□□ -0.23
HSPG2-201ENST00000374673 DPP4P27487 766 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 AQP1P29972 269 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 PRKAR1BP31321 381 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 GSK3BP49841 420 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 TOMM20Q15388 145 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 NDUFAF6Q330K2 333 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 ZNF311Q5JNZ3 666 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 C6orf89Q6UWU4 347 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 TRILQ7L0X0 811 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 PATL1Q86TB9 770 aaKnown RBP13.64□□□□□ -0.23
HSPG2-201ENST00000374673 IFNEQ86WN2 208 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 GRAMD2AQ8IUY3 354 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 DEFB107AQ8IZN7 70 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 ARSGQ96EG1 525 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 ARMC7Q9H6L4 198 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 DNAJB12Q9NXW2 375 aaKnown RBP13.64□□□□□ -0.23
HSPG2-201ENST00000374673 CHST2Q9Y4C5 530 aa13.64□□□□□ -0.23
HSPG2-201ENST00000374673 A0A087WZY1 265 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 TRGV5A0A0B4J1U4 118 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 PRORSD1PA6NEY8 169 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 ZIC3O60481 467 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 CDC40O60508 579 aaKnown RBP eCLIP13.63□□□□□ -0.23
HSPG2-201ENST00000374673 BCAS1O75363 584 aaPredicted RBP13.63□□□□□ -0.23
HSPG2-201ENST00000374673 MFN2O95140 757 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 FOXK1P85037 733 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 CBFBQ13951 182 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 SPATS1Q496A3 300 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 GLYR1Q49A26 553 aaPredicted RBP13.63□□□□□ -0.23
HSPG2-201ENST00000374673 EIPR1Q53HC9 387 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 WIPI1Q5MNZ9 446 aaPredicted RBP13.63□□□□□ -0.23
HSPG2-201ENST00000374673 ARHGAP11AQ6P4F7 1023 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 DHRS4L2Q6PKH6 230 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 RINLQ6ZS11 566 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 SPPL2CQ8IUH8 684 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 TMCO5AQ8N6Q1 288 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 GALNT11Q8NCW6 608 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 BHLHE22Q8NFJ8 381 aaPredicted RBP13.63□□□□□ -0.23
HSPG2-201ENST00000374673 OR5W2Q8NH69 310 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 NEIL3Q8TAT5 605 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 CNOT9Q92600 299 aaKnown RBP13.63□□□□□ -0.23
HSPG2-201ENST00000374673 KLHDC3Q9BQ90 382 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 SLC6A15Q9H2J7 730 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 LDAHQ9H6V9 325 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 TAS2R10Q9NYW0 307 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 ADA2Q9NZK5 511 aa13.63□□□□□ -0.23
HSPG2-201ENST00000374673 GMPR2Q9P2T1 348 aaKnown RBP13.63□□□□□ -0.23
HSPG2-201ENST00000374673 ZNF407Q9C0G0 2248 aa13.62□□□□□ -0.23
HSPG2-201ENST00000374673 A0A1B0GTH9 108 aa13.62□□□□□ -0.23
HSPG2-201ENST00000374673 M0QX08 132 aa13.62□□□□□ -0.23
HSPG2-201ENST00000374673 AQP7O14520 342 aa13.62□□□□□ -0.23
HSPG2-201ENST00000374673 GMFGO60234 142 aa13.62□□□□□ -0.23
HSPG2-201ENST00000374673 CYP7B1O75881 506 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms