RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 QSOX2Q6ZRP7 698 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 SIRT6Q8N6T7 355 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 OR13C2Q8NGS9 318 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 PEX11GQ96HA9 241 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 SECISBP2Q96T21 854 aaKnown RBP17.35■□□□□ 0.37
USP49-202ENST00000373010 SIAEQ9HAT2 523 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 FOLH1BQ9HBA9 442 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 SACM1LQ9NTJ5 587 aa17.35■□□□□ 0.37
USP49-202ENST00000373010 SLC30A4O14863 429 aa17.34■□□□□ 0.37
USP49-202ENST00000373010 ADAM11O75078 769 aa17.34■□□□□ 0.37
USP49-202ENST00000373010 IL1AP01583 271 aa17.34■□□□□ 0.37
USP49-202ENST00000373010 IGKV1D-16P01601 117 aa17.34■□□□□ 0.37
USP49-202ENST00000373010 PSPHP78330 225 aa17.34■□□□□ 0.37
USP49-202ENST00000373010 DSG2Q14126 1118 aa17.34■□□□□ 0.37
USP49-202ENST00000373010 CARTPTQ16568 116 aa17.34■□□□□ 0.37
USP49-202ENST00000373010 TMEM44Q2T9K0 475 aa17.34■□□□□ 0.37
USP49-202ENST00000373010 THSD4Q6ZMP0 1018 aa17.34■□□□□ 0.37
USP49-202ENST00000373010 RNF113BQ8IZP6 322 aaKnown RBP17.34■□□□□ 0.37
USP49-202ENST00000373010 OR51G2Q8NGK0 314 aa17.34■□□□□ 0.37
USP49-202ENST00000373010 BPIFA2Q96DR5 249 aa17.34■□□□□ 0.37
USP49-202ENST00000373010 KCTD7Q96MP8 289 aa17.34■□□□□ 0.37
USP49-202ENST00000373010 PTCHD1Q96NR3 888 aa17.34■□□□□ 0.37
USP49-202ENST00000373010 DCLRE1CQ96SD1 692 aaKnown RBP17.34■□□□□ 0.37
USP49-202ENST00000373010 MAP3K3Q99759 626 aa17.34■□□□□ 0.37
USP49-202ENST00000373010 PLEKHB1Q9UF11 243 aaPredicted RBP17.34■□□□□ 0.37
USP49-202ENST00000373010 DTX4Q9Y2E6 619 aa17.34■□□□□ 0.37
USP49-202ENST00000373010 V9GYH0 126 aa17.34■□□□□ 0.37
USP49-202ENST00000373010 TMEM131Q92545 1883 aa17.34■□□□□ 0.37
USP49-202ENST00000373010 BHLHE40O14503 412 aa17.33■□□□□ 0.37
USP49-202ENST00000373010 RFPL3O75679 317 aa17.33■□□□□ 0.37
USP49-202ENST00000373010 GLULP15104 373 aa17.33■□□□□ 0.37
USP49-202ENST00000373010 PRTGQ2VWP7 1150 aa17.33■□□□□ 0.37
USP49-202ENST00000373010 TMPRSS11AQ6ZMR5 421 aa17.33■□□□□ 0.37
USP49-202ENST00000373010 GDPD3Q7L5L3 318 aa17.33■□□□□ 0.37
USP49-202ENST00000373010 OR8H2Q8N162 312 aa17.33■□□□□ 0.37
USP49-202ENST00000373010 OR52L1Q8NGH7 329 aa17.33■□□□□ 0.37
USP49-202ENST00000373010 SPRYD4Q8WW59 207 aaPredicted RBP17.33■□□□□ 0.37
USP49-202ENST00000373010 HPS1Q92902 700 aa17.33■□□□□ 0.37
USP49-202ENST00000373010 HCAR1Q9BXC0 346 aa17.33■□□□□ 0.37
USP49-202ENST00000373010 FLRT3Q9NZU0 649 aa17.33■□□□□ 0.37
USP49-202ENST00000373010 AQP9O43315 295 aa17.33■□□□□ 0.36
USP49-202ENST00000373010 FOXS1O43638 330 aa17.33■□□□□ 0.36
USP49-202ENST00000373010 SSX4O60224 188 aa17.33■□□□□ 0.36
USP49-202ENST00000373010 FMO6PO60774 539 aa17.33■□□□□ 0.36
USP49-202ENST00000373010 SNX4O95219 450 aa17.33■□□□□ 0.36
USP49-202ENST00000373010 PTTG1O95997 202 aa17.33■□□□□ 0.36
USP49-202ENST00000373010 IGHA1P01876 353 aa17.33■□□□□ 0.36
USP49-202ENST00000373010 BLKP51451 505 aa17.33■□□□□ 0.36
USP49-202ENST00000373010 AMZ1Q400G9 498 aa17.33■□□□□ 0.36
USP49-202ENST00000373010 DESI1Q6ICB0 168 aa17.33■□□□□ 0.36
USP49-202ENST00000373010 MEPEQ9NQ76 525 aaPredicted RBP17.33■□□□□ 0.36
USP49-202ENST00000373010 TNFRSF10DQ9UBN6 386 aa17.33■□□□□ 0.36
USP49-202ENST00000373010 MUTYHQ9UIF7 546 aa17.33■□□□□ 0.36
USP49-202ENST00000373010 CMAHPQ9Y471 501 aa17.33■□□□□ 0.36
USP49-202ENST00000373010 TRAV27A0A087WT01 109 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 IQCMA0A1B0GVH7 501 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 COQ9O75208 318 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 DRD5P21918 477 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 AZGP1P25311 298 aaKnown RBP17.32■□□□□ 0.36
USP49-202ENST00000373010 GABRA5P31644 462 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 CAV3P56539 151 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 BTG2P78543 158 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 FCRLBQ6BAA4 426 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 RBM12BQ8IXT5 1001 aaKnown RBP17.32■□□□□ 0.36
USP49-202ENST00000373010 KLHL36Q8N4N3 616 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 PSD4Q8NDX1 1056 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 HOXB13Q92826 284 aaPredicted RBP17.32■□□□□ 0.36
USP49-202ENST00000373010 RIT1Q92963 219 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 TMED9Q9BVK6 235 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 TBC1D17Q9HA65 648 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 TMEM27Q9HBJ8 222 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 ABCB9Q9NP78 766 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 MED31Q9Y3C7 131 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 WNT1P04628 370 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 SAGP10523 405 aaPredicted RBP17.32■□□□□ 0.36
USP49-202ENST00000373010 RNH1P13489 461 aaKnown RBP17.32■□□□□ 0.36
USP49-202ENST00000373010 BMP7P18075 431 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 STX4Q12846 297 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 COL19A1Q14993 1142 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 NIPAL3Q6P499 406 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 ARL14Q8N4G2 192 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 METTL27Q8N6F8 245 aaPredicted RBP17.32■□□□□ 0.36
USP49-202ENST00000373010 ZNF559Q9BR84 538 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 KATNB1Q9BVA0 655 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 IFT27Q9BW83 186 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 MIXL1Q9H2W2 232 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 POLE3Q9NRF9 147 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 THADAQ6YHU6 1953 aa17.32■□□□□ 0.36
USP49-202ENST00000373010 A0A1B0GWA3 101 aa17.31■□□□□ 0.36
USP49-202ENST00000373010 IFI6P09912 130 aa17.31■□□□□ 0.36
USP49-202ENST00000373010 CHRNB1P11230 501 aa17.31■□□□□ 0.36
USP49-202ENST00000373010 CELP19835 753 aa17.31■□□□□ 0.36
USP49-202ENST00000373010 IGFBP4P22692 258 aa17.31■□□□□ 0.36
USP49-202ENST00000373010 SLC9A3P48764 834 aa17.31■□□□□ 0.36
USP49-202ENST00000373010 INSL4Q14641 139 aa17.31■□□□□ 0.36
USP49-202ENST00000373010 ZNF79Q15937 498 aa17.31■□□□□ 0.36
USP49-202ENST00000373010 NNATQ16517 81 aa17.31■□□□□ 0.36
USP49-202ENST00000373010 GARNL3Q5VVW2 1013 aa17.31■□□□□ 0.36
USP49-202ENST00000373010 CCBE1Q6UXH8 406 aaPredicted RBP17.31■□□□□ 0.36
USP49-202ENST00000373010 TMPRSS11FQ6ZWK6 438 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms