RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 PPP1R16AQ96I34 528 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 UQCC2Q9BRT2 126 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 BCL2L10Q9HD36 194 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 POLMQ9NP87 494 aaPredicted RBP12.76□□□□□ -0.37
USP49-201ENST00000373006 HCFC1R1Q9NWW0 138 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 KCMF1Q9P0J7 381 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 IRAK3Q9Y616 596 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 TCRBV16S1A1N1A0A5B0 115 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 MAGEB4O15481 346 aaPredicted RBP12.76□□□□□ -0.37
USP49-201ENST00000373006 RRASP10301 218 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 PEPDP12955 493 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 RGS8P57771 180 aaPredicted RBP12.76□□□□□ -0.37
USP49-201ENST00000373006 TAS2R38P59533 333 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 TGM3Q08188 693 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 SNTB2Q13425 540 aaKnown RBP12.76□□□□□ -0.37
USP49-201ENST00000373006 LY6G5CQ5SRR4 150 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 CDC73Q6P1J9 531 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 ZNF793Q6ZN11 406 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 ZNF620Q6ZNG0 422 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 BOLLQ8N9W6 283 aaKnown RBP12.76□□□□□ -0.37
USP49-201ENST00000373006 ABHD4Q8TB40 342 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 THAP4Q8WY91 577 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 COQ10AQ96MF6 247 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 SLC38A1Q9H2H9 487 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 RHBGQ9H310 441 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 UBQLN3Q9H347 655 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 SAGE1Q9NXZ1 904 aa12.76□□□□□ -0.37
USP49-201ENST00000373006 MEIKINA0A087WXM9 373 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 A0A0G2JPF8 293 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 HNRNPCL3B7ZW38 293 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 M0R233 179 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 GATBO75879 557 aaKnown RBP12.75□□□□□ -0.37
USP49-201ENST00000373006 INHAP05111 366 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 HNRNPCL4P0DMR1 293 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 GAAP10253 952 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 TUSC1Q2TAM9 212 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 LHX8Q68G74 356 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 OR4C11Q6IEV9 310 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 COQ8AQ8NI60 647 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 HMGB4Q8WW32 186 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 ADAMTS14Q8WXS8 1223 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 ZSWIM3Q96MP5 696 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 CAMK1GQ96NX5 476 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 MCHR1Q99705 422 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 SEC22CQ9BRL7 303 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 SCPEP1Q9HB40 452 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 SLC23A2Q9UGH3 650 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 BAIAP2Q9UQB8 552 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 A0A0G2JK05 382 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 A0A1W2PPL8 197 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 ZNF593O00488 134 aaPredicted RBP12.75□□□□□ -0.37
USP49-201ENST00000373006 CASC3O15234 703 aaKnown RBP12.75□□□□□ -0.37
USP49-201ENST00000373006 TBX19O60806 448 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 NDUFV2P19404 249 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 STAT5AP42229 794 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 CCR8P51685 355 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 FAM46CQ5VWP2 391 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 GDF7Q7Z4P5 450 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 TTLQ8NG68 377 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 RPLP0P6Q8NHW5 317 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 ACOT11Q8WXI4 607 aaPredicted RBP12.75□□□□□ -0.37
USP49-201ENST00000373006 RBPMSQ93062 196 aaKnown RBP12.75□□□□□ -0.37
USP49-201ENST00000373006 CNRIP1Q96F85 164 aaPredicted RBP12.75□□□□□ -0.37
USP49-201ENST00000373006 DTD2Q96FN9 168 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 NARS2Q96I59 477 aaKnown RBP12.75□□□□□ -0.37
USP49-201ENST00000373006 DPH1Q9BZG8 443 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 GSX2Q9BZM3 304 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 AUNIPQ9H7T9 357 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 TRIM36Q9NQ86 728 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 SLC7A7Q9UM01 511 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 TCF20Q9UGU0 1960 aaKnown RBP12.75□□□□□ -0.37
USP49-201ENST00000373006 J3QRE1 110 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 CCL16O15467 120 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 LRG1P02750 347 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 ZGLP1P0C6A0 271 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 SULT1A3P0DMM9 295 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 SULT1A4P0DMN0 295 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 CLUP10909 449 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 FOSL1P15407 271 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 F8A1P23610 371 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 FPR3P25089 353 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 NTSP30990 170 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 CCR2P41597 374 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 OR12D2P58182 307 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 AGERQ15109 404 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 CCNJQ5T5M9 372 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 MAMSTRQ6ZN01 415 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 LINC00469Q8N7U9 141 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 OR7D2Q96RA2 312 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 FANCFQ9NPI8 374 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 PRKAG2Q9UGJ0 569 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 MAB21L2Q9Y586 359 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 HRH3Q9Y5N1 445 aa12.75□□□□□ -0.37
USP49-201ENST00000373006 RANBP2P49792 3224 aaKnown RBP12.74□□□□□ -0.37
USP49-201ENST00000373006 TRABD2BA6NFA1 517 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 NFATC1O95644 943 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 HOXB3P14651 431 aaPredicted RBP12.74□□□□□ -0.37
USP49-201ENST00000373006 TSPAN5P62079 268 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 DEFB115Q30KQ5 88 aa12.74□□□□□ -0.37
USP49-201ENST00000373006 ACSM3Q53FZ2 586 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms