RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 MKKSQ9NPJ1 570 aaPredicted RBP23.08■■□□□ 1.29
CTSA-203ENST00000372459 DNAJC27Q9NZQ0 273 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 B3GNT3Q9Y2A9 372 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 NUP210LQ5VU65 1888 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 TCRBV16S1A1N1A0A5B0 115 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 TLX2O43763 284 aaPredicted RBP23.07■■□□□ 1.28
CTSA-203ENST00000372459 PRKYO43930 277 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 AQP6Q13520 282 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 SLC25A30Q5SVS4 291 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 MEDAGQ5VYS4 303 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 RABEPKQ7Z6M1 372 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 POGLUT1Q8NBL1 392 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 CEP76Q8TAP6 659 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 RNF217Q8TC41 542 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 CLIP3Q96DZ5 547 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 RPL36Q9Y3U8 105 aaKnown RBP23.07■■□□□ 1.28
CTSA-203ENST00000372459 LYPD3O95274 346 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 RORAP35398 523 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 SNAPC1Q16533 368 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 MRGPREQ86SM8 312 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 OR8D4Q8NGM9 314 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 OR8D2Q9GZM6 311 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 LRRN3Q9H3W5 708 aa23.07■■□□□ 1.28
CTSA-203ENST00000372459 POLR1CO15160 346 aaPredicted RBP23.06■■□□□ 1.28
CTSA-203ENST00000372459 GABARAPO95166 117 aa23.06■■□□□ 1.28
CTSA-203ENST00000372459 IRF3Q14653 427 aa23.06■■□□□ 1.28
CTSA-203ENST00000372459 SPCS2Q15005 226 aa23.06■■□□□ 1.28
CTSA-203ENST00000372459 PLAG1Q6DJT9 500 aa23.06■■□□□ 1.28
CTSA-203ENST00000372459 RHBDD2Q6NTF9 364 aa23.06■■□□□ 1.28
CTSA-203ENST00000372459 C16orf87Q6PH81 154 aa23.06■■□□□ 1.28
CTSA-203ENST00000372459 WDR88Q6ZMY6 472 aa23.06■■□□□ 1.28
CTSA-203ENST00000372459 LINC00299Q6ZSB3 139 aa23.06■■□□□ 1.28
CTSA-203ENST00000372459 ZNF550Q7Z398 422 aa23.06■■□□□ 1.28
CTSA-203ENST00000372459 ZNF321PQ8N8H1 164 aa23.06■■□□□ 1.28
CTSA-203ENST00000372459 SLC2A12Q8TD20 617 aa23.06■■□□□ 1.28
CTSA-203ENST00000372459 CRELD1Q96HD1 420 aa23.06■■□□□ 1.28
CTSA-203ENST00000372459 SLC38A2Q96QD8 506 aa23.06■■□□□ 1.28
CTSA-203ENST00000372459 CDCA4Q9BXL8 241 aa23.06■■□□□ 1.28
CTSA-203ENST00000372459 TRIM2Q9C040 744 aa23.06■■□□□ 1.28
CTSA-203ENST00000372459 IL20Q9NYY1 176 aa23.06■■□□□ 1.28
CTSA-203ENST00000372459 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.06■■□□□ 1.28
CTSA-203ENST00000372459 PPICP45877 212 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 EFNB1P98172 346 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 NSDHLQ15738 373 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 CTF1Q16619 201 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 ZNF620Q6ZNG0 422 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 COX4I2Q96KJ9 171 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 TEX12Q9BXU0 123 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 SYNDIG1Q9H7V2 258 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 A0A0B4J2E0 115 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 A0A1B0GX12 115 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 IGKV3-11P04433 115 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 VCANP13611 3396 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 ACAA2P42765 397 aaKnown RBP23.05■■□□□ 1.28
CTSA-203ENST00000372459 P2RY8Q86VZ1 359 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 SLC15A4Q8N697 577 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 CLDN22Q8N7P3 220 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 ZSCAN1Q8NBB4 408 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 ZNF721Q8TF20 911 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 DAZLQ92904 295 aaKnown RBP23.05■■□□□ 1.28
CTSA-203ENST00000372459 ART5Q96L15 291 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 TSSK6Q9BXA6 273 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 ZNF223Q9UK11 482 aaPredicted RBP23.05■■□□□ 1.28
CTSA-203ENST00000372459 CDH10Q9Y6N8 788 aa23.05■■□□□ 1.28
CTSA-203ENST00000372459 IGHV5-10-1A0A0J9YXX1 117 aa23.04■■□□□ 1.28
CTSA-203ENST00000372459 CHP2O43745 196 aa23.04■■□□□ 1.28
CTSA-203ENST00000372459 CNOT3O75175 753 aaKnown RBP23.04■■□□□ 1.28
CTSA-203ENST00000372459 CER1O95813 267 aa23.04■■□□□ 1.28
CTSA-203ENST00000372459 DDAH2O95865 285 aa23.04■■□□□ 1.28
CTSA-203ENST00000372459 ADORA3P0DMS8 318 aa23.04■■□□□ 1.28
CTSA-203ENST00000372459 PRSS58Q8IYP2 241 aa23.04■■□□□ 1.28
CTSA-203ENST00000372459 TMEM163Q8TC26 289 aa23.04■■□□□ 1.28
CTSA-203ENST00000372459 LRR1Q96L50 414 aa23.04■■□□□ 1.28
CTSA-203ENST00000372459 HS6ST2Q96MM7 605 aa23.04■■□□□ 1.28
CTSA-203ENST00000372459 FBXO4Q9UKT5 387 aa23.04■■□□□ 1.28
CTSA-203ENST00000372459 MKL2Q9ULH7 1088 aa23.04■■□□□ 1.28
CTSA-203ENST00000372459 ADAMTS9Q9P2N4 1935 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 SYNDIG1LA6NDD5 238 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 SERINC4A6NH21 518 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 PATE3B3GLJ2 98 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 PTNP21246 168 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 NR4A1P22736 598 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 EFNA3P52797 238 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 MLLT10P55197 1068 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 OCA2Q04671 838 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 PRKCDQ05655 676 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 TIGD6Q17RP2 521 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 CLEC12AQ5QGZ9 265 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 CDK20Q8IZL9 346 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 LSMEM1Q8N8F7 131 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 OR4C3Q8NH37 302 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 OR14A16Q8NHC5 309 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 PFN4Q8NHR9 129 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 GRHL3Q8TE85 626 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 OIT3Q8WWZ8 545 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 NECAB3Q96P71 396 aaPredicted RBP23.03■■□□□ 1.28
CTSA-203ENST00000372459 OR6C1Q96RD1 312 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 VN1R1Q9GZP7 353 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 TMEM5Q9Y2B1 443 aa23.03■■□□□ 1.28
CTSA-203ENST00000372459 MED31Q9Y3C7 131 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms