RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 HYAL1Q12794 435 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 C18orf63Q68DL7 685 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 SDR9C7Q8NEX9 313 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 GTF2H4Q92759 462 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 FAM71F1Q96KD3 344 aaPredicted RBP13.79□□□□□ -0.2
NDC1-201ENST00000371429 DMRTB1Q96MA1 342 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 TUBA1CQ9BQE3 449 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 GSKIPQ9P0R6 139 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 MICAL3Q7RTP6 2002 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 A0A1B0GX78 115 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 C12orf71A8MTZ7 269 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 OR7A17O14581 309 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 IGLV3-27P01718 113 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 GTF2F2P13984 249 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 SMAD2Q15796 467 aaKnown RBP13.79□□□□□ -0.2
NDC1-201ENST00000371429 CCSMST1Q4G0I0 132 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 ZNF554Q86TJ5 538 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 OR5AK2Q8NH90 309 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 EVA1AQ9H8M9 152 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 LTB4R2Q9NPC1 389 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 KCNIP1Q9NZI2 227 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 MRPL33O75394 65 aaKnown RBP13.79□□□□□ -0.2
NDC1-201ENST00000371429 IL32P24001 234 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 MAGEA2P43356 314 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 TMEM196Q5HYL7 178 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.79□□□□□ -0.2
NDC1-201ENST00000371429 TRMT10AQ8TBZ6 339 aaKnown RBP13.79□□□□□ -0.2
NDC1-201ENST00000371429 TMEM181Q9P2C4 612 aa13.79□□□□□ -0.2
NDC1-201ENST00000371429 G3V3Y1 287 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 CFL1P23528 166 aaKnown RBP13.78□□□□□ -0.2
NDC1-201ENST00000371429 POU3F1Q03052 451 aaPredicted RBP13.78□□□□□ -0.2
NDC1-201ENST00000371429 DPTQ07507 201 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 TRUB1Q8WWH5 349 aaKnown RBP13.78□□□□□ -0.2
NDC1-201ENST00000371429 DNTTIP1Q9H147 329 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 RGS9O75916 674 aaPredicted RBP13.78□□□□□ -0.2
NDC1-201ENST00000371429 BMP2P12643 396 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 NPPBP16860 134 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 PIP5KL1Q5T9C9 394 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 IFI44Q8TCB0 444 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 RSC1A1Q92681 617 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 MUCL1Q96DR8 90 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 TREX2Q9BQ50 279 aaPredicted RBP13.78□□□□□ -0.2
NDC1-201ENST00000371429 MYO10Q9HD67 2058 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 ZNF850A8MQ14 1090 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 CTNSO60931 367 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 DNAJB5O75953 348 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 F10P00742 488 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 MAGEA3P43357 314 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 PUDPQ08623 228 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 GK3PQ14409 553 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 OR1Q1Q15612 314 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 ENTPD8Q5MY95 495 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 MEX3DQ86XN8 651 aaKnown RBP13.78□□□□□ -0.2
NDC1-201ENST00000371429 TMEM178AQ8NBL3 297 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 RCBTB1Q8NDN9 531 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 FAM46BQ96A09 425 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 HCAR1Q9BXC0 346 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 ULBP2Q9BZM5 246 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 LIN28AQ9H9Z2 209 aaKnown RBP13.78□□□□□ -0.2
NDC1-201ENST00000371429 PAK1IP1Q9NWT1 392 aaPredicted RBP13.78□□□□□ -0.2
NDC1-201ENST00000371429 AKAP11Q9UKA4 1901 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 A0A1W2PPC4 97 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 SLC1A7O00341 560 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 HCRTR1O43613 425 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 UCHL1P09936 223 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 AMY2BP19961 511 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 MRPL2Q5T653 305 aaKnown RBP13.78□□□□□ -0.2
NDC1-201ENST00000371429 SLC35F2Q8IXU6 374 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 LCORQ96JN0 433 aaPredicted RBP13.78□□□□□ -0.2
NDC1-201ENST00000371429 WASH6PQ9NQA3 447 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 MYH7BA7E2Y1 1941 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 PLSCR5A0PG75 271 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 VNN2O95498 520 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 IGLV3-25P01717 112 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 NKAIN1Q4KMZ8 207 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 TSSK4Q6SA08 328 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 TMEM64Q6YI46 380 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 MFSD8Q8NHS3 518 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 CCDC115Q96NT0 180 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 MMP27Q9H306 513 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 ZNF337Q9Y3M9 751 aa13.78□□□□□ -0.2
NDC1-201ENST00000371429 EVPLQ92817 2033 aa13.77□□□□□ -0.2
NDC1-201ENST00000371429 SLC16A7O60669 478 aa13.77□□□□□ -0.2
NDC1-201ENST00000371429 DIRAS3O95661 229 aa13.77□□□□□ -0.2
NDC1-201ENST00000371429 GCAP28676 217 aa13.77□□□□□ -0.2
NDC1-201ENST00000371429 RPS5P46782 204 aaKnown RBP13.77□□□□□ -0.2
NDC1-201ENST00000371429 PITPNBP48739 271 aa13.77□□□□□ -0.2
NDC1-201ENST00000371429 PYHIN1Q6K0P9 492 aa13.77□□□□□ -0.2
NDC1-201ENST00000371429 ABHD17CQ6PCB6 329 aa13.77□□□□□ -0.2
NDC1-201ENST00000371429 ZNF704Q6ZNC4 412 aaPredicted RBP13.77□□□□□ -0.2
NDC1-201ENST00000371429 TRAPPC6BQ86SZ2 158 aa13.77□□□□□ -0.2
NDC1-201ENST00000371429 PATE1Q8WXA2 126 aa13.77□□□□□ -0.2
NDC1-201ENST00000371429 ELF4Q99607 663 aaPredicted RBP13.77□□□□□ -0.2
NDC1-201ENST00000371429 ACTR6Q9GZN1 396 aa13.77□□□□□ -0.2
NDC1-201ENST00000371429 OR51B6Q9H340 312 aa13.77□□□□□ -0.2
NDC1-201ENST00000371429 PRDM9Q9NQV7 894 aa13.77□□□□□ -0.2
NDC1-201ENST00000371429 NUDT15Q9NV35 164 aa13.77□□□□□ -0.2
NDC1-201ENST00000371429 COL22A1Q8NFW1 1626 aaPredicted RBP13.77□□□□□ -0.2
NDC1-201ENST00000371429 KANTRA0A1W2PQU2 76 aa13.77□□□□□ -0.21
NDC1-201ENST00000371429 MEGF11A6BM72 1044 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms