RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 CMTM1Q8IZ96 169 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 BPIFA2Q96DR5 249 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 INTS14Q96SY0 518 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 PIGBOS1A0A0B4J2F0 54 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 PAHP00439 452 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 OR5M10Q6IEU7 315 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 SERPINA11Q86U17 422 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 SGPP2Q8IWX5 399 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 POC1BQ8TC44 478 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 ADOQ96SZ5 270 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 VIRMAQ69YN4 1812 aaKnown RBP20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 MYH11P35749 1972 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 KNDC1Q76NI1 1749 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 PRSS38A1L453 326 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 CASC3O15234 703 aaKnown RBP20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 CD53P19397 219 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 GDF1P27539 372 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 CXCR4P61073 352 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 ERVK-16P61578 105 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 C4orf36Q96KX1 117 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 PRRC1Q96M27 445 aa20.82■□□□□ 0.92
TM9SF3-201ENST00000371142 CDC14CA4D256 554 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 TTLL8A6PVC2 850 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 RGS6P49758 472 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 TMEM201Q5SNT2 666 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 AKAP12Q02952 1782 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 B4GAT1O43505 415 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 LIPCP11150 499 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 EEF1A2Q05639 463 aaKnown RBP20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 PTPRRQ15256 657 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 OR2T35Q8NGX2 323 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 STK35Q8TDR2 534 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 MYADMQ96S97 322 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 ARSBP15848 533 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 ZNF417Q8TAU3 575 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 C3orf30Q96M34 536 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 OR7D2Q96RA2 312 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 TRBV11-1A0A0K0K1C0 115 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 ANKRD30BLA7E2S9 258 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 BCAS1O75363 584 aaPredicted RBP20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 RPS5P46782 204 aaKnown RBP20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 ZNF136P52737 540 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 GPR149Q86SP6 731 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 ARFGAP1Q8N6T3 406 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 DNAJB11Q9UBS4 358 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 ZNF443Q9Y2A4 671 aaPredicted RBP20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 A0A0U1RQK1 487 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 DBHP09172 617 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 POU3F2P20265 443 aaPredicted RBP20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 CSNK1A1P48729 337 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 VEGFBP49765 207 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 ENTPD8Q5MY95 495 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 CTSL3PQ5NE16 218 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 DCP2Q8IU60 420 aaKnown RBP20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 ZNF681Q96N22 645 aa20.81■□□□□ 0.92
TM9SF3-201ENST00000371142 TSPAN15O95858 294 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 BCL2A1Q16548 175 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 ACSM3Q53FZ2 586 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 LDLRAD1Q5T700 205 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 BORAQ6PGQ7 559 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 MYLIPQ8WY64 445 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 INIPQ9NRY2 104 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 A6NIN4 97 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 EFCAB7A8K855 629 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 PEX14O75381 377 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 SLC39A11Q8N1S5 342 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 DLSTP36957 453 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 FGFBP1Q14512 234 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 TMEM53Q6P2H8 277 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 SLC35A3Q9Y2D2 325 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 LOC285095A0A1B0GVY8 99 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 ZNF736B4DX44 427 aaPredicted RBP20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 ARPC1BO15143 372 aaKnown RBP20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 C1orf105O95561 183 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 DHRS4L1P0CG22 281 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 SLC46A2Q9BY10 475 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 UPK1BO75841 260 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 IFNA4P05014 189 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 GK2Q14410 553 aaPredicted RBP20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 RAB41Q5JT25 222 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 OR10A5Q9H207 317 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 OR10A2Q9H208 303 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 HAO2Q9NYQ3 351 aa20.8■□□□□ 0.92
TM9SF3-201ENST00000371142 COL2A1P02458 1487 aaPredicted RBP20.79■□□□□ 0.92
TM9SF3-201ENST00000371142 HHLA1C9JL84 531 aa20.79■□□□□ 0.92
TM9SF3-201ENST00000371142 WDR5P61964 334 aaKnown RBP20.79■□□□□ 0.92
TM9SF3-201ENST00000371142 ELMOD3Q96FG2 381 aa20.79■□□□□ 0.92
TM9SF3-201ENST00000371142 SDSLQ96GA7 329 aa20.79■□□□□ 0.92
TM9SF3-201ENST00000371142 NTMT1Q9BV86 223 aa20.79■□□□□ 0.92
TM9SF3-201ENST00000371142 CHRDQ9H2X0 955 aa20.79■□□□□ 0.92
TM9SF3-201ENST00000371142 TREX1Q9NSU2 369 aa20.79■□□□□ 0.92
TM9SF3-201ENST00000371142 CA5BQ9Y2D0 317 aa20.79■□□□□ 0.92
TM9SF3-201ENST00000371142 AHRP35869 848 aa20.79■□□□□ 0.92
TM9SF3-201ENST00000371142 C3orf38Q5JPI3 329 aa20.79■□□□□ 0.92
TM9SF3-201ENST00000371142 DPY19L2P1Q6NXN4 242 aa20.79■□□□□ 0.92
TM9SF3-201ENST00000371142 PODNL1Q6PEZ8 512 aa20.79■□□□□ 0.92
TM9SF3-201ENST00000371142 HTR3DQ70Z44 454 aa20.79■□□□□ 0.92
TM9SF3-201ENST00000371142 LMNTD1Q8N9Z9 388 aa20.79■□□□□ 0.92
TM9SF3-201ENST00000371142 OR9A4Q8NGU2 314 aa20.79■□□□□ 0.92
TM9SF3-201ENST00000371142 TRMT2BQ96GJ1 504 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms