RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 RAD1O60671 282 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 CCDC58Q4VC31 144 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 ADAMTSL4Q6UY14 1074 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 OR5H2Q8NGV7 314 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 GPR148Q8TDV2 347 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 DDX31Q9H8H2 851 aaKnown RBP18.44■□□□□ 0.54
LMO4-202ENST00000370544 CER1O95813 267 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 CDK1P06493 297 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 PTGS2P35354 604 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 PBX2P40425 430 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 SEMA3BQ13214 749 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 ERV3-1Q14264 604 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 SLC22A10Q63ZE4 541 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 WBP2NLQ6ICG8 309 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 OR2T11Q8NH01 316 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 TBC1D20Q96BZ9 403 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 FOLH1BQ9HBA9 442 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 NLKQ9UBE8 527 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 ZNF337Q9Y3M9 751 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 MLC1Q15049 377 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 COL28A1Q2UY09 1125 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 SPARTQ8N0X7 666 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 NAT6Q93015 286 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 FAM71F1Q96KD3 344 aaPredicted RBP18.44■□□□□ 0.54
LMO4-202ENST00000370544 INTS14Q96SY0 518 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 CPPED1Q9BRF8 314 aaPredicted RBP18.44■□□□□ 0.54
LMO4-202ENST00000370544 KCNIP1Q9NZI2 227 aa18.44■□□□□ 0.54
LMO4-202ENST00000370544 MMP12P39900 470 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 RGS19P49795 217 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 FGL1Q08830 312 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 CD300LFQ8TDQ1 290 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 TMEM168Q9H0V1 697 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 H3BUI4 141 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 HTR3BO95264 441 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 RAB38P57729 211 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 TNFRSF17Q02223 184 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 TMEM163Q8TC26 289 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 UTP4Q969X6 686 aaKnown RBP18.43■□□□□ 0.54
LMO4-202ENST00000370544 SACM1LQ9NTJ5 587 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 UBE2J1Q9Y385 318 aaPredicted RBP18.43■□□□□ 0.54
LMO4-202ENST00000370544 SPEF1Q9Y4P9 236 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 CENPBD1B2RD01 187 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 BCAT2O15382 392 aaPredicted RBP18.43■□□□□ 0.54
LMO4-202ENST00000370544 ARAFP10398 606 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 IFNGR1P15260 489 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 EEF1A2Q05639 463 aaKnown RBP18.43■□□□□ 0.54
LMO4-202ENST00000370544 ZNF691Q5VV52 312 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 C19orf47Q8N9M1 422 aaKnown RBP18.43■□□□□ 0.54
LMO4-202ENST00000370544 SYNPO2LQ9H987 977 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 UBQLN4Q9NRR5 601 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 J3KTA2 159 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 SRPX2O60687 465 aaPredicted RBP18.43■□□□□ 0.54
LMO4-202ENST00000370544 EN2P19622 333 aaPredicted RBP18.43■□□□□ 0.54
LMO4-202ENST00000370544 PPP1R3BQ86XI6 285 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 ZNF417Q8TAU3 575 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 ASB12Q8WXK4 309 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 C7orf34Q96L11 122 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 AK6Q9Y3D8 172 aaKnown RBP18.43■□□□□ 0.54
LMO4-202ENST00000370544 CACNA1SQ13698 1873 aa18.43■□□□□ 0.54
LMO4-202ENST00000370544 AQP9O43315 295 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 IDUAP35475 653 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 PTH2RP49190 550 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 CSNK2A1P68400 391 aaPredicted RBP18.42■□□□□ 0.54
LMO4-202ENST00000370544 C3P1Q6ZMU1 363 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 ASCC1Q8N9N2 400 aaKnown RBP18.42■□□□□ 0.54
LMO4-202ENST00000370544 OR8J2Q8NGG1 315 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 OR51T1Q8NGJ9 327 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 NELFAQ9H3P2 528 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 ZNF175Q9Y473 711 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 PCDHGA8Q9Y5G5 932 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 CAPNS1P04632 268 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 NUDT7P0C024 238 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 B3GNT8Q7Z7M8 397 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 TMEFF1Q8IYR6 380 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 SPPL3Q8TCT6 385 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 ZNF226Q9NYT6 803 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 MYEF2Q9P2K5 600 aaKnown RBP18.42■□□□□ 0.54
LMO4-202ENST00000370544 F5H5K5 113 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 GFRA2O00451 464 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 PTTG1O95997 202 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 IFNA5P01569 189 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 CD34P28906 385 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 S100A2P29034 98 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 EIF2S3P41091 472 aaKnown RBP18.42■□□□□ 0.54
LMO4-202ENST00000370544 PGGHGQ32M88 737 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 ANKRD54Q6NXT1 300 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 KHSRPQ92945 711 aaKnown RBP eCLIP18.42■□□□□ 0.54
LMO4-202ENST00000370544 HLA-CQ95604 372 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 OR51E2Q9H255 320 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 OR2S2Q9NQN1 319 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 B4GAT1O43505 415 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 CRTAPO75718 401 aaPredicted RBP18.42■□□□□ 0.54
LMO4-202ENST00000370544 ARG2P78540 354 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 RTN4RL1Q86UN2 441 aaPredicted RBP18.42■□□□□ 0.54
LMO4-202ENST00000370544 ZNF595Q8IYB9 648 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 NPRL2Q8WTW4 380 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 TCEAL3Q969E4 200 aa18.42■□□□□ 0.54
LMO4-202ENST00000370544 CNOT2Q9NZN8 540 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms