RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 FLRT2O43155 660 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 NOS1APO75052 506 aaPredicted RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 PRKRAO75569 313 aaKnown RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 B3GALT4O96024 378 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 GKN3PP0CG01 181 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 ACP2P11117 423 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 PTNP21246 168 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 FPR3P25089 353 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 TRHRP34981 398 aaPredicted RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 PIGAP37287 484 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 MAP3K8P41279 467 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 GNG2P59768 71 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 OC90Q02509 493 aaPredicted RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 HNRNPA0Q13151 305 aaKnown RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 KLHL26Q53HC5 615 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 PDSS1Q5T2R2 415 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 ZNF613Q6PF04 617 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 UBALD2Q8IYN6 164 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 FBXL6Q8N531 539 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 SLC16A11Q8NCK7 471 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 OR8H1Q8NGG4 311 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 OR52E2Q8NGJ4 325 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 OR6T1Q8NGN1 323 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 GATAD2BQ8WXI9 593 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 SLC46A1Q96NT5 459 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 MROQ9BYG7 248 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 ZBTB20Q9HC78 741 aaPredicted RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 PRDM9Q9NQV7 894 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 DIABLOQ9NR28 239 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 GPR52Q9Y2T5 361 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 SLC6A5Q9Y345 797 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 PCDHGA10Q9Y5H3 936 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 SESN1Q9Y6P5 492 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 OR2A25A4D2G3 310 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 FAM172BPA6NC97 362 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 LILRA5A6NI73 299 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 METTL12A8MUP2 240 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 FMO6PO60774 539 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 SEC14L2O76054 403 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 ZNF432O94892 652 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 NSA2O95478 260 aaKnown RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 ADORA3P0DMS8 318 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 CD1EP15812 388 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 FUT1P19526 365 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 CD40LGP29965 261 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 PYCR1P32322 319 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 HTR3AP46098 478 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 CAPZBP47756 277 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 RGS6P49758 472 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 SNRPGP62308 76 aaKnown RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 ZNF91Q05481 1191 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 MLLT11Q13015 90 aaPredicted RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 FAM189A2Q15884 450 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 ARHGAP11BQ3KRB8 267 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 TBRG1Q3YBR2 411 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 UBE2UQ5VVX9 321 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 FAHD1Q6P587 224 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 WDR53Q7Z5U6 358 aaPredicted RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 LRRC56Q8IYG6 542 aaPredicted RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 ENTHD1Q8IYW4 607 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 CADM4Q8NFZ8 388 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 CCL4L1Q8NHW4 92 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 THEM6Q8WUY1 208 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 EDAQ92838 391 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 ZNF566Q969W8 418 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 MVB12AQ96EY5 273 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 FCRL1Q96LA6 429 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 CRB3Q9BUF7 120 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 TMEM121BQ9BXQ6 578 aaPredicted RBP4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 OR2B2Q9GZK3 357 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 PLEKHA1Q9HB21 404 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 FOLH1BQ9HBA9 442 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 SMURF1Q9HCE7 757 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 RXFP3Q9NSD7 469 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 PLCXD1Q9NUJ7 323 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 FTSJ1Q9UET6 329 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 ZNF222Q9UK12 451 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 ING4Q9UNL4 249 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 CORINQ9Y5Q5 1042 aa4.96□□□□□ -1.62
SMNDC1-202ENST00000369603 TMEM265A0A087WTH1 108 aa4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 EFCAB7A8K855 629 aa4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 PLD2O14939 933 aa4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 ADAM23O75077 832 aa4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 RGS9O75916 674 aaPredicted RBP4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 APOL3O95236 402 aa4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 PEPDP12955 493 aa4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 C21orf33P30042 268 aaPredicted RBP4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 PDX1P52945 283 aa4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 CSTF1Q05048 431 aaKnown RBP4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 FAM53BQ14153 422 aa4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 SMN1Q16637 294 aaKnown RBP4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 SYT6Q5T7P8 510 aaPredicted RBP4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 UBE2Q1Q7Z7E8 422 aa4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 PPP1R3BQ86XI6 285 aa4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 KLBQ86Z14 1044 aa4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 MMP21Q8N119 569 aa4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 CADM3Q8N126 398 aa4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 OR6N2Q8NGY6 317 aa4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 NSMAFQ92636 917 aa4.95□□□□□ -1.62
SMNDC1-202ENST00000369603 MBOAT4Q96T53 435 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms