RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 SELENOWP63302 87 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 DUSP2Q05923 314 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 ZNF750Q32MQ0 723 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 LINC00303Q3SY05 128 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 GUSBP11Q6P575 273 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 ZDHHC21Q8IVQ6 265 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 GPR135Q8IZ08 494 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 OR2L13Q8N349 312 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 SVOPLQ8N434 492 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 C7orf57Q8NEG2 295 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 OR4D9Q8NGE8 314 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 OR5T3Q8NGG3 340 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 ZNF675Q8TD23 568 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 SSC4DQ8WTU2 575 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 IPCEF1Q8WWN9 437 aaPredicted RBP8.11□□□□□ -1.11
TPM3-213ENST00000368545 SDCCAG3Q96C92 435 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 VPS50Q96JG6 964 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 ZNF570Q96NI8 536 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 OR51I1Q9H343 314 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 HEYLQ9NQ87 328 aaPredicted RBP8.11□□□□□ -1.11
TPM3-213ENST00000368545 ING3Q9NXR8 418 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 Q9UFV3 132 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 BAG5Q9UL15 447 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 OAZ3Q9UMX2 235 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 U3KQA8 63 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 NUP210LQ5VU65 1888 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 CLDN4O14493 209 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 GNGT2O14610 69 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 CHST10O43529 356 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 FGF17O60258 216 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 PLOD3O60568 738 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 CPNE6O95741 557 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 MT-ND1P03886 318 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 HMGN2P05204 90 aaKnown RBP8.1□□□□□ -1.11
TPM3-213ENST00000368545 TFPTP0C1Z6 253 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 UQCRBP14927 111 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 ZNF23P17027 643 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 CRISP3P54108 245 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 ARSFP54793 590 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 ITGA1P56199 1179 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 BIKQ13323 160 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 CYBRD1Q53TN4 286 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 PRAMEF8Q5VWM4 474 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 PRAMEF7Q5VXH5 474 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 EPHX4Q8IUS5 362 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 SLC38A5Q8WUX1 472 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 ST8SIA4Q92187 359 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 MMABQ96EY8 250 aaPredicted RBP8.1□□□□□ -1.11
TPM3-213ENST00000368545 TMEM19Q96HH6 336 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 ZNF597Q96LX8 424 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 ZNF607Q96SK3 696 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 NUDT22Q9BRQ3 303 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 COQ10BQ9H8M1 238 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 CUTCQ9NTM9 273 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 TMEM9Q9P0T7 183 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 TRPC4Q9UBN4 977 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 ZNF639Q9UID6 485 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 SERTAD3Q9UJW9 196 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 PADI2Q9Y2J8 665 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 SCN2AQ99250 2005 aa8.1□□□□□ -1.11
TPM3-213ENST00000368545 A0A1W2PS29 197 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 CPED1A4D0V7 1026 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 SAC3D1A6NKF1 404 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 DUXAA6NLW8 204 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 H3BMH7 237 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 UPK1AO00322 258 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 DPM1O60762 260 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 LDB3O75112 727 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 DNAJB6O75190 326 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 RASAL1O95294 804 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 SLC35E2P0CK97 266 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 AQP1P29972 269 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 CRYBA2P53672 197 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 PRKAG1P54619 331 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 VAMP2P63027 116 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 ACY1Q03154 408 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 LASP1Q14847 261 aaKnown RBP8.09□□□□□ -1.11
TPM3-213ENST00000368545 LTB4RQ15722 352 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 MSMPQ1L6U9 139 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 ZNF628Q5EBL2 1059 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 PIWIL3Q7Z3Z3 882 aaKnown RBP8.09□□□□□ -1.11
TPM3-213ENST00000368545 ARMC8Q8IUR7 673 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 SLC44A2Q8IWA5 706 aaPredicted RBP8.09□□□□□ -1.11
TPM3-213ENST00000368545 EID2Q8N6I1 236 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 BBS10Q8TAM1 723 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 GEMIN6Q8WXD5 167 aaKnown RBP8.09□□□□□ -1.11
TPM3-213ENST00000368545 SPSB4Q96A44 273 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 TPD52L3Q96J77 140 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 MAGED4Q96JG8 741 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 TREX2Q9BQ50 279 aaPredicted RBP8.09□□□□□ -1.11
TPM3-213ENST00000368545 OSBPL11Q9BXB4 747 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 ACTRT3Q9BYD9 372 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 LRRN3Q9H3W5 708 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 SERHL2Q9H4I8 314 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 CALML5Q9NZT1 146 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 CDC14AQ9UNH5 594 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 LIPT1Q9Y234 373 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 ASXL3Q9C0F0 2248 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 SYNDIG1LA6NDD5 238 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms