RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 DOK4Q8TEW6 326 aa10.08□□□□□ -0.8
H3F3A-202ENST00000366814 HOXB13Q92826 284 aaPredicted RBP10.08□□□□□ -0.8
H3F3A-202ENST00000366814 UCN2Q96RP3 112 aa10.08□□□□□ -0.8
H3F3A-202ENST00000366814 ZNF559Q9BR84 538 aa10.08□□□□□ -0.8
H3F3A-202ENST00000366814 G6PC3Q9BUM1 346 aa10.08□□□□□ -0.8
H3F3A-202ENST00000366814 CDCA4Q9BXL8 241 aa10.08□□□□□ -0.8
H3F3A-202ENST00000366814 RACGAP1Q9H0H5 632 aa10.08□□□□□ -0.8
H3F3A-202ENST00000366814 CHST2Q9Y4C5 530 aa10.08□□□□□ -0.8
H3F3A-202ENST00000366814 CPED1A4D0V7 1026 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 CDHR4A6H8M9 788 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 TMEM8BA6NDV4 472 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 TMEM150CB9EJG8 249 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 ENTPD6O75354 484 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 KCNK2O95069 426 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 CD1CP29017 333 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 RFX3P48380 749 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 CLK1P49759 484 aaKnown RBP10.07□□□□□ -0.8
H3F3A-202ENST00000366814 CLDN6P56747 220 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 OR1D5P58170 312 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 MAT1AQ00266 395 aaKnown RBP10.07□□□□□ -0.8
H3F3A-202ENST00000366814 CDK5Q00535 292 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 OCA2Q04671 838 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.07□□□□□ -0.8
H3F3A-202ENST00000366814 COL9A2Q14055 689 aaPredicted RBP10.07□□□□□ -0.8
H3F3A-202ENST00000366814 ZNF267Q14586 743 aaPredicted RBP10.07□□□□□ -0.8
H3F3A-202ENST00000366814 SNAPC1Q16533 368 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 CTF1Q16619 201 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 DGUOKQ16854 277 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 TMEM44Q2T9K0 475 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 SLC25A30Q5SVS4 291 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 CDK20Q8IZL9 346 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 RNF113BQ8IZP6 322 aaKnown RBP10.07□□□□□ -0.8
H3F3A-202ENST00000366814 FAM26EQ8N5C1 309 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 FAM181AQ8N9Y4 354 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 FAM46AQ96IP4 442 aaKnown RBP10.07□□□□□ -0.8
H3F3A-202ENST00000366814 SPSB2Q99619 263 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 CNPPD1Q9BV87 410 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 YIPF2Q9BWQ6 316 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 TMEM27Q9HBJ8 222 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 PLGRKTQ9HBL7 147 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 CUTCQ9NTM9 273 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 PRODH2Q9UF12 536 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 SLC7A7Q9UM01 511 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 MMACHCQ9Y4U1 282 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 RP1P56715 2156 aa10.07□□□□□ -0.8
H3F3A-202ENST00000366814 GXYLT2A0PJZ3 443 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 PEX12O00623 359 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 TLX2O43763 284 aaPredicted RBP10.06□□□□□ -0.8
H3F3A-202ENST00000366814 CLPXO76031 633 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 TP53P04637 393 aaPredicted RBP10.06□□□□□ -0.8
H3F3A-202ENST00000366814 IGFBP1P08833 259 aaPredicted RBP10.06□□□□□ -0.8
H3F3A-202ENST00000366814 ADORA3P0DMS8 318 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 OMPP47874 163 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 HOXC5Q00444 222 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 NCF4Q15080 339 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 NR0B2Q15466 257 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 TIMM50Q3ZCQ8 353 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 AMZ1Q400G9 498 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 HES3Q5TGS1 186 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 AP1ARQ63HQ0 302 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 PRICKLE2Q7Z3G6 844 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 KMT5CQ86Y97 462 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 NKAIN4Q8IVV8 208 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 NRMQ8IXM6 262 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 IQCF1Q8N6M8 205 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 ZNF614Q8N883 585 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 WDR36Q8NI36 951 aaKnown RBP10.06□□□□□ -0.8
H3F3A-202ENST00000366814 RNF217Q8TC41 542 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 ZCCHC14Q8WYQ9 949 aaKnown RBP10.06□□□□□ -0.8
H3F3A-202ENST00000366814 SLC35B4Q969S0 331 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 TMEM80Q96HE8 168 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 PLEKHA8Q96JA3 519 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 OR1F2PQ96R84 312 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 NDC1Q9BTX1 674 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 SPRTNQ9H040 489 aaPredicted RBP10.06□□□□□ -0.8
H3F3A-202ENST00000366814 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.06□□□□□ -0.8
H3F3A-202ENST00000366814 TBC1D23Q9NUY8 699 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 DNAJC27Q9NZQ0 273 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 SELENONQ9NZV5 590 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 CNIH4Q9P003 139 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 ERGIC3Q9Y282 383 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 TMEM5Q9Y2B1 443 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 OR10H1Q9Y4A9 318 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 CACNA1BQ00975 2339 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 AKAP13Q12802 2813 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 TRABD2BA6NFA1 517 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 MED26O95402 600 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 FBXO45P0C2W1 286 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 DBTP11182 482 aaKnown RBP10.06□□□□□ -0.8
H3F3A-202ENST00000366814 S1PR1P21453 382 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 ALAS2P22557 587 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 NR4A1P22736 598 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 SSTR4P31391 388 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 CSTF2P33240 577 aaKnown RBP eCLIP10.06□□□□□ -0.8
H3F3A-202ENST00000366814 SLC15A1P46059 708 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 SEPHS1P49903 392 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 EMDP50402 254 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 PGDP52209 483 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 ZNF136P52737 540 aa10.06□□□□□ -0.8
H3F3A-202ENST00000366814 BTG2P78543 158 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms