RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SYT6Q5T7P8 510 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 THAP7Q9BT49 309 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 DUSP23Q9BVJ7 150 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 RGCCQ9H4X1 137 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 HMGN2P05204 90 aaKnown RBP11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 BMP1P13497 986 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 HTR2BP41595 481 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 TM4SF4P48230 202 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 GIPRP48546 466 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 CTXN1P60606 82 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 COQ10AQ96MF6 247 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 IL17FQ96PD4 163 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 ZNF701Q9NV72 531 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 SPTBN1Q01082 2364 aaKnown RBP11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 SCN2AQ99250 2005 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 GFRA2O00451 464 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 ZNF26P17031 533 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 TTC9BQ8N6N2 239 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 BABAM2Q9NXR7 383 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 MOKQ9UQ07 419 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 GPX2P18283 190 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 PRDX3P30048 256 aaKnown RBP11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 RNF144AP50876 292 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 TLE3Q04726 772 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 KIAA0895LQ68EN5 471 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 MEPCEQ7L2J0 689 aaKnown RBP11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 ABHD12BQ7Z5M8 362 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 SLC35F3Q8IY50 421 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 TMEM151AQ8N4L1 468 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 OR4K13Q8NH42 304 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 BRIX1Q8TDN6 353 aaKnown RBP11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 TIMP2P16035 220 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 FBXO46Q6PJ61 603 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 OR5AR1Q8NGP9 310 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 SLC6A7Q99884 636 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 VNN3Q9NY84 501 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 SLC7A7Q9UM01 511 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 MYADML2A6NDP7 307 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 A8MVJ9 347 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 CERS1P27544 350 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 TNFRSF4P43489 277 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 NAT6Q93015 286 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 RNF186Q9NXI6 227 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 CYP8B1Q9UNU6 501 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 GPR75O95800 540 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 EIF2S3P41091 472 aaKnown RBP11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 SOX3P41225 446 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 XKR7Q5GH72 579 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 TMPPEQ6ZT21 453 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 CMIPQ8IY22 773 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 TMEM102Q8N9M5 508 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 CASTOR1Q8WTX7 329 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 UBQLN4Q9NRR5 601 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 OBP2AQ9NY56 170 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 ADAM23O75077 832 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 TGM6O95932 706 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 ZNF35P13682 527 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 TAS2R19P59542 299 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 TRNP1Q6NT89 227 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 POLE4Q9NR33 117 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 CD300AQ9UGN4 299 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 RTCAO00442 366 aaKnown RBP11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 STATHP02808 62 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 ZNF888P0CJ79 500 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 PLK5Q496M5 336 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 CLVS2Q5SYC1 327 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 LRFN4Q6PJG9 635 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 LINC01465Q8N7H1 131 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 ZDHHC1Q8WTX9 485 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 DEDD2Q8WXF8 326 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 HHLA2Q9UM44 414 aa11.31□□□□□ -0.6
CDC42BPA-203ENST00000366766 B8ZZF3 427 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 MAOAP21397 527 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 PCBD1P61457 104 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 CYP27C1Q4G0S4 372 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 MFSD9Q8NBP5 474 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 AMY2AP04746 511 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 IFNGR1P15260 489 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 SBSNQ6UWP8 590 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 LACC1Q8IV20 430 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 C3orf58Q8NDZ4 430 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 OR9A2Q8NGT5 310 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 LOC102725191A0A1B0GVB3 256 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 GAPDHSO14556 408 aaPredicted RBP11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 AXIN1O15169 862 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 MLLT10P55197 1068 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 TAS2R46P59540 309 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 MRPS21P82921 87 aaKnown RBP11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 KDM4DQ6B0I6 523 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 OR14A16Q8NHC5 309 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 PIAS3Q9Y6X2 628 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 ARRDC5A6NEK1 342 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 SYT7O43581 403 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 ZNF43P17038 809 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 FIGNL1Q6PIW4 674 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 GPR137CQ8N3F9 429 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 TCEAL3Q969E4 200 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 SNX18Q96RF0 628 aa11.3□□□□□ -0.6
CDC42BPA-203ENST00000366766 LYSMD1Q96S90 227 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms