RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 ASB9Q96DX5 294 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 SLC41A3Q96GZ6 507 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 RASL10BQ96S79 203 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 SERHLQ9NQF3 203 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 TOR4AQ9NXH8 423 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 GALNT8Q9NY28 637 aa8.46□□□□□ -1.06
UPF2-202ENST00000357604 UNC119BA6NIH7 251 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 C10orf142B7Z368 130 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 MPZL2O60487 215 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 PGM3O95394 542 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 RHCEP18577 417 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 PRPS1P60891 318 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 EBPQ15125 230 aaKnown RBP8.45□□□□□ -1.06
UPF2-202ENST00000357604 HMBOX1Q6NT76 420 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 RINLQ6ZS11 566 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 ZDHHC21Q8IVQ6 265 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 KLHL15Q96M94 604 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 RIBC2Q9H4K1 309 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 ZNF43P17038 809 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 TACR1P25103 407 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 TIPARPQ7Z3E1 657 aaKnown RBP8.45□□□□□ -1.06
UPF2-202ENST00000357604 FAM110BQ8TC76 370 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 CNRIP1Q96F85 164 aaPredicted RBP8.45□□□□□ -1.06
UPF2-202ENST00000357604 PIP5K1AQ99755 562 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 C15orf41Q9Y2V0 281 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 SNPHO15079 494 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 WDR1O75083 606 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 OR5F1O95221 314 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 ALDOCP09972 364 aaKnown RBP8.45□□□□□ -1.06
UPF2-202ENST00000357604 ACP2P11117 423 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 ZNF823P16415 610 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 EIF1AXP47813 144 aaKnown RBP8.45□□□□□ -1.06
UPF2-202ENST00000357604 PDX1P52945 283 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 YBX1P67809 324 aaKnown RBP8.45□□□□□ -1.06
UPF2-202ENST00000357604 DUSP8Q13202 625 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 RNPS1Q15287 305 aaKnown RBP8.45□□□□□ -1.06
UPF2-202ENST00000357604 MDGA2Q7Z553 956 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 SPPL2CQ8IUH8 684 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 STX19Q8N4C7 294 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 KIF2BQ8N4N8 673 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 CISD2Q8N5K1 135 aaKnown RBP8.45□□□□□ -1.06
UPF2-202ENST00000357604 CNEP1R1Q8N9A8 125 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 SLC39A7Q92504 469 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 NRTNQ99748 197 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 LIN28AQ9H9Z2 209 aaKnown RBP8.45□□□□□ -1.06
UPF2-202ENST00000357604 ACTR3BQ9P1U1 418 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 NDRG3Q9UGV2 375 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 RASD1Q9Y272 281 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 TRAV36DV7A0A075B6V5 113 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 TMED7-TICAM2A0A0A6YYA0 188 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 ARPC2O15144 300 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 PDE5AO76074 875 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 DKK1O94907 266 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 ZNF3P17036 446 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 GGT1P19440 569 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 ACVR2AP27037 513 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 GSK3BP49841 420 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 CDH12P55289 794 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 P3H2Q8IVL5 708 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 KDF1Q8NAX2 398 aaPredicted RBP8.45□□□□□ -1.06
UPF2-202ENST00000357604 FNDC8Q8TC99 324 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 ABHD17AQ96GS6 310 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 EGLN2Q96KS0 407 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 EXOSC3Q9NQT5 275 aaKnown RBP8.45□□□□□ -1.06
UPF2-202ENST00000357604 EIF3KQ9UBQ5 218 aaKnown RBP8.45□□□□□ -1.06
UPF2-202ENST00000357604 CARD8Q9Y2G2 431 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 TMED7Q9Y3B3 224 aa8.45□□□□□ -1.06
UPF2-202ENST00000357604 COL5A1P20908 1838 aaPredicted RBP8.44□□□□□ -1.06
UPF2-202ENST00000357604 SLC22A20A6NK97 555 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 G3V3Y1 287 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 HMGN1P05114 100 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 SLC37A1P57057 533 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 MAPK14Q16539 360 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 DUSP5Q16690 384 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 C1orf185Q5T7R7 199 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 FAM91A1Q658Y4 838 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 FAM180BQ6P0A1 224 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 YTHDF3Q7Z739 585 aaKnown RBP8.44□□□□□ -1.06
UPF2-202ENST00000357604 CPNE4Q96A23 557 aaPredicted RBP8.44□□□□□ -1.06
UPF2-202ENST00000357604 MUCL1Q96DR8 90 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 SLC35A4Q96G79 324 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 C16orf58Q96GQ5 468 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 CLPTM1LQ96KA5 538 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 CPPED1Q9BRF8 314 aaPredicted RBP8.44□□□□□ -1.06
UPF2-202ENST00000357604 IFT27Q9BW83 186 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 PIGMQ9H3S5 423 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.44□□□□□ -1.06
UPF2-202ENST00000357604 DNAJB9Q9UBS3 223 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 EGFL7Q9UHF1 273 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 MGAT4BQ9UQ53 548 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 SNX5Q9Y5X3 404 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 TO15178 435 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 SMNDC1O75940 238 aaKnown RBP eCLIP8.44□□□□□ -1.06
UPF2-202ENST00000357604 OR6B1O95007 311 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 VAMP5O95183 116 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 NGFRP08138 427 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 IMPDH2P12268 514 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 BMP4P12644 408 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 ANXA8P13928 327 aa8.44□□□□□ -1.06
UPF2-202ENST00000357604 SLC9A3P48764 834 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms