RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 INTS14Q96SY0 518 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 ASIC5Q9NY37 505 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 CNIH4Q9P003 139 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 ASCC3Q8N3C0 2202 aaKnown RBP11.04□□□□□ -0.64
COL9A1-202ENST00000357250 CA3P07451 260 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 NPR2P20594 1047 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 P2RY2P41231 377 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 LRRC37A5PQ49AS3 106 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 AWAT2Q6E213 333 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 MEPCEQ7L2J0 689 aaKnown RBP11.04□□□□□ -0.64
COL9A1-202ENST00000357250 IGFN1Q86VF2 1251 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 TMIGD2Q96BF3 282 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 MSLNLQ96KJ4 702 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 PRRT1Q99946 306 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 FZD3Q9NPG1 666 aa11.04□□□□□ -0.64
COL9A1-202ENST00000357250 C17orf105B2RV13 164 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 B8ZZF3 427 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 EIF2DP41214 584 aaKnown RBP11.03□□□□□ -0.64
COL9A1-202ENST00000357250 GIPRP48546 466 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 HNRNPFP52597 415 aaKnown RBP11.03□□□□□ -0.64
COL9A1-202ENST00000357250 FOXK1P85037 733 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 MLC1Q15049 377 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 WBP2NLQ6ICG8 309 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 HMBOX1Q6NT76 420 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 NLRP8Q86W28 1048 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 DEFB119Q8N690 84 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 LINC01465Q8N7H1 131 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 LSM14AQ8ND56 463 aaKnown RBP11.03□□□□□ -0.64
COL9A1-202ENST00000357250 MAFIPQ8WZ33 124 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 OR52D1Q9H346 318 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 PRELID1Q9Y255 219 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 KLK4Q9Y5K2 254 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 IER3IP1Q9Y5U9 82 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 CDHR4A6H8M9 788 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 SYT5O00445 386 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 IFNGR1P15260 489 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 PBX2P40425 430 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 TSFMP43897 325 aaKnown RBP11.03□□□□□ -0.64
COL9A1-202ENST00000357250 S100A12P80511 92 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 MRPS21P82921 87 aaKnown RBP11.03□□□□□ -0.64
COL9A1-202ENST00000357250 GALK2Q01415 458 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 SEMA3BQ13214 749 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 FAM69BQ5VUD6 431 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 RAB11FIP2Q7L804 512 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 IL22RA1Q8N6P7 574 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 ZSCAN1Q8NBB4 408 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 OR2T35Q8NGX2 323 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 DPCDQ9BVM2 203 aaPredicted RBP11.03□□□□□ -0.64
COL9A1-202ENST00000357250 SIAEQ9HAT2 523 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 INIPQ9NRY2 104 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 ERVK-19Q9WJR5 959 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 NME7Q9Y5B8 376 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 ADAMTSL1Q8N6G6 1762 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 IGLV3-10A0A075B6K4 115 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 A8MVJ9 347 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 FAM155AB1AL88 458 aaPredicted RBP11.03□□□□□ -0.64
COL9A1-202ENST00000357250 RAB3DO95716 219 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 AKAIN1P0CW23 69 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 ACPPP15309 386 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 PTH2RP49190 550 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 POU3F4P49335 361 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 PSPHP78330 225 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 RELAQ04206 551 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 HMGN2P46Q86SG4 172 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 OR5K2Q8NHB8 316 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 NDNFQ8TB73 568 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 RRNAD1Q96FB5 475 aaKnown RBP11.03□□□□□ -0.64
COL9A1-202ENST00000357250 UBQLN4Q9NRR5 601 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 SPATA6Q9NWH7 488 aaPredicted RBP11.03□□□□□ -0.64
COL9A1-202ENST00000357250 HHLA2Q9UM44 414 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 PRSS21Q9Y6M0 314 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 HMX3A6NHT5 357 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 TRIM64CA6NLI5 447 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 CPMP14384 443 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 RAB5BP61020 215 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 ZXDBP98169 803 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 ACSM3Q53FZ2 586 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 PRAMEF8Q5VWM4 474 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 PRAMEF7Q5VXH5 474 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 CARD17Q5XLA6 110 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 SFRP4Q6FHJ7 346 aaPredicted RBP11.03□□□□□ -0.64
COL9A1-202ENST00000357250 BEND4Q6ZU67 534 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 TMPRSS9Q7Z410 1059 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 MCATQ8IVS2 390 aaKnown RBP11.03□□□□□ -0.64
COL9A1-202ENST00000357250 MFSD9Q8NBP5 474 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 PPP1R35Q8TAP8 253 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 SLC25A44Q96H78 314 aaPredicted RBP11.03□□□□□ -0.64
COL9A1-202ENST00000357250 C7orf34Q96L11 122 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 PPIL3Q9H2H8 161 aaKnown RBP11.03□□□□□ -0.64
COL9A1-202ENST00000357250 OR2S2Q9NQN1 319 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 C5AR2Q9P296 337 aa11.03□□□□□ -0.64
COL9A1-202ENST00000357250 GGT3PA6NGU5 568 aa11.02□□□□□ -0.64
COL9A1-202ENST00000357250 BOLA2-SMG1P6H3BVE0 249 aa11.02□□□□□ -0.64
COL9A1-202ENST00000357250 F3P13726 295 aa11.02□□□□□ -0.64
COL9A1-202ENST00000357250 NR0B1P51843 470 aaKnown RBP11.02□□□□□ -0.64
COL9A1-202ENST00000357250 NFATC4Q14934 902 aa11.02□□□□□ -0.64
COL9A1-202ENST00000357250 PODNL1Q6PEZ8 512 aa11.02□□□□□ -0.64
COL9A1-202ENST00000357250 Q6ZSR6 202 aa11.02□□□□□ -0.64
COL9A1-202ENST00000357250 ZNF595Q8IYB9 648 aa11.02□□□□□ -0.64
COL9A1-202ENST00000357250 LSMEM2Q8N112 164 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms