RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 CUTCQ9NTM9 273 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 GLTPQ9NZD2 209 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 K7ERQ8 282 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 LCMT2O60294 686 aaKnown RBP14.02□□□□□ -0.16
LMX1B-201ENST00000355497 AFF3P51826 1226 aaKnown RBP14.02□□□□□ -0.16
LMX1B-201ENST00000355497 FAM189BP81408 668 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 ACSM3Q53FZ2 586 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 PLCXD3Q63HM9 321 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 FAM180BQ6P0A1 224 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 ADAMTS16Q8TE57 1224 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 ELP4Q96EB1 424 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 SFXN2Q96NB2 322 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 BOCQ9BWV1 1114 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 PPA2Q9H2U2 334 aa14.02□□□□□ -0.16
LMX1B-201ENST00000355497 ANKRD34BA5PLL1 514 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 C17orf105B2RV13 164 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 LAMTOR5O43504 91 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 DCTP40126 519 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 PSMB10P40306 273 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 TSFMP43897 325 aaKnown RBP14.02□□□□□ -0.17
LMX1B-201ENST00000355497 PITX1P78337 314 aaPredicted RBP14.02□□□□□ -0.17
LMX1B-201ENST00000355497 OR7A5Q15622 319 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 DEFB110Q30KQ9 67 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 CPZQ66K79 652 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 TPRA1Q86W33 373 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 B3GNT7Q8NFL0 401 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 STEAP2Q8NFT2 490 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 SLC17A9Q9BYT1 436 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 LOC102725191A0A1B0GVB3 256 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 TSPAN11A1L157 253 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 B4DXG7 233 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 ADAMTS4O75173 837 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 EFNA3P52797 238 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 GTDC1Q4AE62 458 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 C6orf132Q5T0Z8 1188 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 S100A7AQ86SG5 101 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 ISCA2Q86U28 154 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 ZFP82Q8N141 532 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 TXNL4BQ9NX01 149 aaKnown RBP14.02□□□□□ -0.17
LMX1B-201ENST00000355497 OR6C2Q9NZP2 312 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 HPGDSO60760 199 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 SCAF4O95104 1147 aaKnown RBP14.02□□□□□ -0.17
LMX1B-201ENST00000355497 SEC61A1P61619 476 aaKnown RBP14.02□□□□□ -0.17
LMX1B-201ENST00000355497 TMEM244Q5VVB8 128 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 SERPINA12Q8IW75 414 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 TANKQ92844 425 aa14.02□□□□□ -0.17
LMX1B-201ENST00000355497 STK17BO94768 372 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 TAS2R30P59541 319 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 DSC1Q08554 894 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 C3orf49Q96BT1 292 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 C8orf33Q9H7E9 229 aaPredicted RBP14.01□□□□□ -0.17
LMX1B-201ENST00000355497 GAPDHSO14556 408 aaPredicted RBP14.01□□□□□ -0.17
LMX1B-201ENST00000355497 FOLR3P41439 243 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 SLC14A1Q13336 389 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 TMEM201Q5SNT2 666 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 PIP5KL1Q5T9C9 394 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 SLC6A19Q695T7 634 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 KDELC1Q6UW63 502 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 SMIM15Q7Z3B0 74 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 BSCL2Q96G97 398 aaPredicted RBP14.01□□□□□ -0.17
LMX1B-201ENST00000355497 SYT17Q9BSW7 474 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 XYLT2Q9H1B5 865 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 V9GY05 133 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 ZNF701M0R085 212 aaPredicted RBP14.01□□□□□ -0.17
LMX1B-201ENST00000355497 NTSR1P30989 418 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 MFSD6LQ8IWD5 586 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 CASD1Q96PB1 797 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 ZNF300Q96RE9 604 aaPredicted RBP14.01□□□□□ -0.17
LMX1B-201ENST00000355497 SLC38A1Q9H2H9 487 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 GFOD1Q9NXC2 390 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 VSX1Q9NZR4 365 aaPredicted RBP14.01□□□□□ -0.17
LMX1B-201ENST00000355497 CA14Q9ULX7 337 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 TMEM131LA2VDJ0 1609 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 P2RX6O15547 441 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 DBHP09172 617 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 CSNK1A1P48729 337 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 VEZF1Q14119 521 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 METAP1DQ6UB28 335 aaPredicted RBP14.01□□□□□ -0.17
LMX1B-201ENST00000355497 SBSNQ6UWP8 590 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 BPHLQ86WA6 291 aaPredicted RBP14.01□□□□□ -0.17
LMX1B-201ENST00000355497 PRR22Q8IZ63 422 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 DTWD1Q8N5C7 304 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 TMIGD2Q96BF3 282 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 CCNL2Q96S94 520 aaPredicted RBP14.01□□□□□ -0.17
LMX1B-201ENST00000355497 HCAR1Q9BXC0 346 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 CNTNAP3Q9BZ76 1288 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 DMRT3Q9NQL9 472 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 LUZP4Q9P127 313 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 NEURL4Q96JN8 1562 aa14.01□□□□□ -0.17
LMX1B-201ENST00000355497 PROS1P07225 676 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 S100A7P31151 101 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 THBS3P49746 956 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 SQSTM1Q13501 440 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 UBE2NLQ5JXB2 153 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 EXOSC6Q5RKV6 272 aaKnown RBP14□□□□□ -0.17
LMX1B-201ENST00000355497 LCTLQ6UWM7 567 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 GPR62Q9BZJ7 368 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 INIPQ9NRY2 104 aa14□□□□□ -0.17
LMX1B-201ENST00000355497 USP36Q9P275 1121 aaKnown RBP14□□□□□ -0.17
LMX1B-201ENST00000355497 G3V2L1 256 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms