RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 PITX2Q99697 317 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 DHRS9Q9BPW9 319 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 TREX1Q9NSU2 369 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 SDHAF2Q9NX18 166 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 REV1Q9UBZ9 1251 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 C19orf25Q9UFG5 118 aaPredicted RBP11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 NOX1Q9Y5S8 564 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 B4DGG1 531 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 NPIPA2E9PIF3 369 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 NPIPA3F8WFD2 350 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 MPIG6BO95866 241 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 GALTP07902 379 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 APEX1P27695 318 aaKnown RBP11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 HENMT1Q5T8I9 393 aaKnown RBP11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 C18orf63Q68DL7 685 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 PCNPQ8WW12 178 aaKnown RBP11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 TOMM40LQ969M1 308 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 ACPTQ9BZG2 426 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 EVA1AQ9H8M9 152 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 C1GALT1Q9NS00 363 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 TMPRSS11EQ9UL52 423 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 DCDC2BA2VCK2 349 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 PEX10O60683 326 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 CRTAPO75718 401 aaPredicted RBP11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 KCNK2O95069 426 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 PLA2G7Q13093 441 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 P2RY14Q15391 338 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 PRRT3Q5FWE3 981 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 LCN10Q6JVE6 187 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 OR5M3Q8NGP4 307 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 SLAMF9Q96A28 289 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 ISL2Q96A47 359 aa11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 NKX6-2Q9C056 277 aaPredicted RBP11.98□□□□□ -0.49
SYNCRIP-201ENST00000355238 DPM1O60762 260 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 POLR2CP19387 275 aaPredicted RBP11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 RAB31Q13636 194 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 ZNF776Q68DI1 518 aaPredicted RBP11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 RPL22L1Q6P5R6 122 aaKnown RBP11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 PODNL1Q6PEZ8 512 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 TP53INP2Q8IXH6 220 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 OR1S1Q8NH92 325 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 ST8SIA4Q92187 359 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 CPPED1Q9BRF8 314 aaPredicted RBP11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 TESQ9UGI8 421 aaKnown RBP11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 PGAP2Q9UHJ9 254 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 MEIS3P1A6NDR6 274 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 PPP1R2P9O14990 202 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 SULT1C4O75897 302 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 CPNE6O95741 557 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 FBXO45P0C2W1 286 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 IL4RP24394 825 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 CRABP1P29762 137 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 PRDX3P30048 256 aaKnown RBP11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 PRKAR1BP31321 381 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 ASAH1Q13510 395 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 KIAA0319Q5VV43 1072 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 SULF2Q8IWU5 870 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 HMGB4Q8WW32 186 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 RLIMQ9NVW2 624 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 DKKL1Q9UK85 242 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 OR1A2Q9Y585 309 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 ZNF860A6NHJ4 632 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 A6NL46 340 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 NCR1O76036 304 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 SERPINA5P05154 406 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 GIPRP48546 466 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 POLR2HP52434 150 aaKnown RBP11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 SLC35F3Q8IY50 421 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 OR51L1Q8NGJ5 315 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 ALKBH4Q9NXW9 302 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 HRH3Q9Y5N1 445 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 TMEM221A6NGB7 291 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 NUDT19A8MXV4 375 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 TMEM225BP0DP42 221 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 CAV3P56539 151 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 RPS25P62851 125 aaKnown RBP11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 MBTPS1Q14703 1052 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 DEFB134Q4QY38 66 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 ACTBL2Q562R1 376 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 FOXB2Q5VYV0 432 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 IL20RBQ6UXL0 311 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 MFSD6LQ8IWD5 586 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 ZFP82Q8N141 532 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 SMIM3Q9BZL3 60 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 NMNAT2Q9BZQ4 307 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 RRAGCQ9HB90 399 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 DIMT1Q9UNQ2 313 aaKnown RBP11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 FBXO7Q9Y3I1 522 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 MYH7P12883 1935 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 C9J4A7 227 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 K7EPK0 472 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 GPR32O75388 356 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 LEFTY1O75610 366 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 RHOP08100 348 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 RNF144AP50876 292 aaPredicted RBP11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 OR2G6Q5TZ20 316 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 FAM71E2Q8N5Q1 922 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 TMEM156Q8N614 296 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 SLC30A7Q8NEW0 376 aa11.97□□□□□ -0.49
SYNCRIP-201ENST00000355238 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms