RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 TSPAN7P41732 249 aa15.86■□□□□ 0.13
VPS13B-201ENST00000355155 WDR88Q6ZMY6 472 aa15.86■□□□□ 0.13
VPS13B-201ENST00000355155 ZNF620Q6ZNG0 422 aa15.86■□□□□ 0.13
VPS13B-201ENST00000355155 ZNF540Q8NDQ6 660 aa15.86■□□□□ 0.13
VPS13B-201ENST00000355155 ISOC1Q96CN7 298 aa15.86■□□□□ 0.13
VPS13B-201ENST00000355155 CTRCQ99895 268 aa15.86■□□□□ 0.13
VPS13B-201ENST00000355155 LHPPQ9H008 270 aa15.86■□□□□ 0.13
VPS13B-201ENST00000355155 ACOT13Q9NPJ3 140 aa15.86■□□□□ 0.13
VPS13B-201ENST00000355155 CTSFQ9UBX1 484 aa15.86■□□□□ 0.13
VPS13B-201ENST00000355155 ICAM5Q9UMF0 924 aa15.86■□□□□ 0.13
VPS13B-201ENST00000355155 NINQ8N4C6 2090 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 GSTT1P30711 240 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 LSM11P83369 360 aaKnown RBP eCLIP15.85■□□□□ 0.13
VPS13B-201ENST00000355155 DAB2P98082 770 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 COL9A2Q14055 689 aaPredicted RBP15.85■□□□□ 0.13
VPS13B-201ENST00000355155 NSDHLQ15738 373 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 MFSD4BQ5TF39 518 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 ERI1Q8IV48 349 aaKnown RBP15.85■□□□□ 0.13
VPS13B-201ENST00000355155 ZNF527Q8NB42 609 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 TMEM255BQ8WV15 326 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 TMEM239Q8WW34 195 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 WWTR1Q9GZV5 400 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 NXF5Q9H1B4 397 aaKnown RBP15.85■□□□□ 0.13
VPS13B-201ENST00000355155 RASSF1Q9NS23 344 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 CDH10Q9Y6N8 788 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 EXPH5Q8NEV8 1989 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 SAGE2PA6NJ88 616 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 KHNYNO15037 678 aaKnown RBP15.85■□□□□ 0.13
VPS13B-201ENST00000355155 MT-ND2P03891 347 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 GP2P55259 537 aaKnown RBP15.85■□□□□ 0.13
VPS13B-201ENST00000355155 LSAMPQ13449 338 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 C1orf189Q5VU69 101 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 ZNF517Q6ZMY9 492 aaPredicted RBP15.85■□□□□ 0.13
VPS13B-201ENST00000355155 ANKRD13BQ86YJ7 626 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 SLC34A3Q8N130 599 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 OR2I1PQ8NGU4 316 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 YIPF6Q96EC8 236 aa15.85■□□□□ 0.13
VPS13B-201ENST00000355155 GPN2Q9H9Y4 310 aaPredicted RBP15.85■□□□□ 0.13
VPS13B-201ENST00000355155 NXT1Q9UKK6 140 aaKnown RBP15.85■□□□□ 0.13
VPS13B-201ENST00000355155 LDOC1O95751 146 aaPredicted RBP15.84■□□□□ 0.13
VPS13B-201ENST00000355155 PCYT1AP49585 367 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 PNLIPRP2P54317 469 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 TMEM236Q5W0B7 351 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 PTCHD4Q6ZW05 846 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 NLGN4XQ8N0W4 816 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 OR8D4Q8NGM9 314 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 NUBPLQ8TB37 319 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 ZFAND2BQ8WV99 257 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 TSC22D3Q99576 134 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 PRRG3Q9BZD7 231 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 SLC19A3Q9BZV2 496 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 MKL2Q9ULH7 1088 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 A0A1W2PQ72 361 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 SLC5A2P31639 672 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 IDH2P48735 452 aaKnown RBP15.84■□□□□ 0.13
VPS13B-201ENST00000355155 HOXC5Q00444 222 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 TMEM44Q2T9K0 475 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 ZC3H14Q6PJT7 736 aaKnown RBP15.84■□□□□ 0.13
VPS13B-201ENST00000355155 LAPTM4BQ86VI4 370 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 AGBL5Q8NDL9 886 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 CRELD1Q96HD1 420 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 OR10H1Q9Y4A9 318 aa15.84■□□□□ 0.13
VPS13B-201ENST00000355155 LOC102723996A0A087X1L8 192 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 A0A1B0GWA3 101 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 KDM4EB2RXH2 506 aaPredicted RBP15.83■□□□□ 0.13
VPS13B-201ENST00000355155 ADAM11O75078 769 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 CPNE3O75131 537 aaKnown RBP15.83■□□□□ 0.13
VPS13B-201ENST00000355155 GKN3PP0CG01 181 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 OCA2Q04671 838 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 GINS1Q14691 196 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 MINDY4Q4G0A6 757 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 SLC27A4Q6P1M0 643 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 ULK3Q6PHR2 472 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 CASP12Q6UXS9 341 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 NRMQ8IXM6 262 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 OR4C3Q8NH37 302 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 DNAJA4Q8WW22 397 aaPredicted RBP15.83■□□□□ 0.13
VPS13B-201ENST00000355155 SPSB2Q99619 263 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 COPS4Q9BT78 406 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 YIPF2Q9BWQ6 316 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 LAT2Q9GZY6 243 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 RACGAP1Q9H0H5 632 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 RXFP3Q9NSD7 469 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 OCIAD1Q9NX40 245 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 COPS7AQ9UBW8 275 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 AASSQ9UDR5 926 aa15.83■□□□□ 0.13
VPS13B-201ENST00000355155 AHCYL1O43865 530 aa15.83■□□□□ 0.12
VPS13B-201ENST00000355155 ALOX12BO75342 701 aa15.83■□□□□ 0.12
VPS13B-201ENST00000355155 IGFBP1P08833 259 aaPredicted RBP15.83■□□□□ 0.12
VPS13B-201ENST00000355155 GRK5P34947 590 aa15.83■□□□□ 0.12
VPS13B-201ENST00000355155 DLX5P56178 289 aa15.83■□□□□ 0.12
VPS13B-201ENST00000355155 SKP2Q13309 424 aa15.83■□□□□ 0.12
VPS13B-201ENST00000355155 NCF4Q15080 339 aa15.83■□□□□ 0.12
VPS13B-201ENST00000355155 TEX47Q8TBZ9 253 aa15.83■□□□□ 0.12
VPS13B-201ENST00000355155 TMEM163Q8TC26 289 aa15.83■□□□□ 0.12
VPS13B-201ENST00000355155 LIPHQ8WWY8 451 aa15.83■□□□□ 0.12
VPS13B-201ENST00000355155 FAM46AQ96IP4 442 aaKnown RBP15.83■□□□□ 0.12
VPS13B-201ENST00000355155 WDR77Q9BQA1 342 aaPredicted RBP15.83■□□□□ 0.12
VPS13B-201ENST00000355155 PLA2G12AQ9BZM1 189 aa15.83■□□□□ 0.12
VPS13B-201ENST00000355155 YIPF3Q9GZM5 350 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms