RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 GSTZ1O43708 216 aaPredicted RBP12.37□□□□□ -0.43
IFT88-202ENST00000351808 PRAMEF11O60813 436 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 UBXN7O94888 489 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 ZNF286BP0CG31 522 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 ARAFP10398 606 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 RPA2P15927 270 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 MGMTP16455 207 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 ACSM1Q08AH1 577 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 GGTA1PQ4G0N0 100 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 NUDT18Q6ZVK8 323 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 TMPRSS11BQ86T26 416 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 SERPINA9Q86WD7 417 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 POGLUT1Q8NBL1 392 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 GJD4Q96KN9 370 aaPredicted RBP12.37□□□□□ -0.43
IFT88-202ENST00000351808 TMEM185BQ9H7F4 350 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 FBXL3Q9UKT7 428 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 BACE2Q9Y5Z0 518 aa12.37□□□□□ -0.43
IFT88-202ENST00000351808 TDRD15B5MCY1 1934 aaKnown RBP12.37□□□□□ -0.43
IFT88-202ENST00000351808 GNG14A0A1W2PPG7 69 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 METTL21EPA6NDL7 271 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 GLTPD2A6NH11 291 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 NPIPB8E9PQR5 432 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 WNT10BO00744 389 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 ETHE1O95571 254 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 ATF1P18846 271 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 SOAT1P35610 550 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 AHRP35869 848 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 LHX1P48742 406 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 RAE1P78406 368 aaKnown RBP12.36□□□□□ -0.43
IFT88-202ENST00000351808 ADNP2Q6IQ32 1131 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 FAM151BQ6UXP7 276 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 ZNF783Q6ZMS7 281 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 OR4K5Q8NGD3 323 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 ZC3H10Q96K80 434 aaKnown RBP12.36□□□□□ -0.43
IFT88-202ENST00000351808 TMEM68Q96MH6 324 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 ZFP42Q96MM3 310 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 GMLQ99445 158 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 TBX5Q99593 518 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 TMEM231Q9H6L2 316 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 CACYBPQ9HB71 228 aaKnown RBP12.36□□□□□ -0.43
IFT88-202ENST00000351808 TREM2Q9NZC2 230 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 A0A0D9SEW6 157 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 RHPN2P1A8MT19 583 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 SNRPGP15A8MWD9 76 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 RNASET2O00584 256 aaKnown RBP12.36□□□□□ -0.43
IFT88-202ENST00000351808 KHDRBS3O75525 346 aaKnown RBP12.36□□□□□ -0.43
IFT88-202ENST00000351808 LGALS2P05162 132 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 VSIG10L2P0DP72 767 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 KCNE1P15382 129 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 ZNF7P17097 686 aaPredicted RBP12.36□□□□□ -0.43
IFT88-202ENST00000351808 GALP22466 123 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 ABCD3P28288 659 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 EIF2S3P41091 472 aaKnown RBP12.36□□□□□ -0.43
IFT88-202ENST00000351808 DOC2AQ14183 400 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 RBM39Q14498 530 aaKnown RBP12.36□□□□□ -0.43
IFT88-202ENST00000351808 GPRC6AQ5T6X5 926 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 FCRL4Q96PJ5 515 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 PINK1Q9BXM7 581 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 GPBP1L1Q9HC44 474 aaPredicted RBP12.36□□□□□ -0.43
IFT88-202ENST00000351808 SPG21Q9NZD8 308 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 GULP1Q9UBP9 304 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 KDM4EB2RXH2 506 aaPredicted RBP12.36□□□□□ -0.43
IFT88-202ENST00000351808 TERTO14746 1132 aaKnown RBP12.36□□□□□ -0.43
IFT88-202ENST00000351808 STX11O75558 287 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 PRAMEF12O95522 483 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 ACTL6AO96019 429 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 HEXAP06865 529 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 ACP5P13686 325 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 PSMA3P25788 255 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 AOAHP28039 575 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 LAP3P28838 519 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 RNF144AP50876 292 aaPredicted RBP12.36□□□□□ -0.43
IFT88-202ENST00000351808 RPS26P62854 115 aaKnown RBP12.36□□□□□ -0.43
IFT88-202ENST00000351808 CACNG1Q06432 222 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 SLC3A1Q07837 685 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 PON3Q15166 354 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 BEX5Q5H9J7 111 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 ELFN2Q5R3F8 820 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 CYB5R2Q6BCY4 276 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 BBS1Q8NFJ9 593 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 ING5Q8WYH8 240 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 ATG10Q9H0Y0 220 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 PIN4Q9Y237 131 aaKnown RBP12.36□□□□□ -0.43
IFT88-202ENST00000351808 PLEKHA6Q9Y2H5 1048 aa12.36□□□□□ -0.43
IFT88-202ENST00000351808 CARHSP1Q9Y2V2 147 aaKnown RBP12.36□□□□□ -0.43
IFT88-202ENST00000351808 A0A1W2PQH9 124 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 UBE2QL1A1L167 161 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 ANKRD66B4E2M5 251 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 PYCARD-AS1I3L0S3 204 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 GFYI3L273 518 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 GBAP04062 536 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 IL5P05113 134 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 PTHLHP12272 177 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 LAG3P18627 525 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 MAPK3P27361 379 aaPredicted RBP12.35□□□□□ -0.43
IFT88-202ENST00000351808 CCND3P30281 292 aaPredicted RBP12.35□□□□□ -0.43
IFT88-202ENST00000351808 ACTR1BP42025 376 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 CASP6P55212 293 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 MC1RQ01726 317 aa12.35□□□□□ -0.43
IFT88-202ENST00000351808 CSRP2Q16527 193 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms