RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 SOX14O95416 240 aa12.43□□□□□ -0.42
UBA3-201ENST00000349511 ADAP00813 363 aa12.43□□□□□ -0.42
UBA3-201ENST00000349511 CSTF2P33240 577 aaKnown RBP eCLIP12.43□□□□□ -0.42
UBA3-201ENST00000349511 RFX3P48380 749 aa12.43□□□□□ -0.42
UBA3-201ENST00000349511 RNF144AP50876 292 aaPredicted RBP12.43□□□□□ -0.42
UBA3-201ENST00000349511 RHAGQ02094 409 aa12.43□□□□□ -0.42
UBA3-201ENST00000349511 CHRNEQ04844 493 aa12.43□□□□□ -0.42
UBA3-201ENST00000349511 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.43□□□□□ -0.42
UBA3-201ENST00000349511 SPEM2Q0P670 501 aa12.43□□□□□ -0.42
UBA3-201ENST00000349511 ZNF267Q14586 743 aaPredicted RBP12.43□□□□□ -0.42
UBA3-201ENST00000349511 SEC23BQ15437 767 aa12.43□□□□□ -0.42
UBA3-201ENST00000349511 C16orf62Q7Z3J2 963 aa12.43□□□□□ -0.42
UBA3-201ENST00000349511 GALNT12Q8IXK2 581 aa12.43□□□□□ -0.42
UBA3-201ENST00000349511 CHAC2Q8WUX2 184 aa12.43□□□□□ -0.42
UBA3-201ENST00000349511 DGAT2Q96PD7 388 aa12.43□□□□□ -0.42
UBA3-201ENST00000349511 PRDM9Q9NQV7 894 aa12.43□□□□□ -0.42
UBA3-201ENST00000349511 ERVK13-1Q9NX77 482 aa12.43□□□□□ -0.42
UBA3-201ENST00000349511 SEC14L3Q9UDX4 400 aa12.43□□□□□ -0.42
UBA3-201ENST00000349511 CLEC2DQ9UHP7 191 aa12.43□□□□□ -0.42
UBA3-201ENST00000349511 TMCC3Q9ULS5 477 aa12.43□□□□□ -0.42
UBA3-201ENST00000349511 C19orf53Q9UNZ5 99 aaPredicted RBP12.43□□□□□ -0.42
UBA3-201ENST00000349511 ASPMQ8IZT6 3477 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 A0A075B6Q4 140 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 SEMA7AO75326 666 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 CSO75390 466 aaKnown RBP12.42□□□□□ -0.42
UBA3-201ENST00000349511 SCRG1O75711 98 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 CBX7O95931 251 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 SCG5P05408 212 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 ACP2P11117 423 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 TNNI3P19429 210 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 FBLP22087 321 aaKnown RBP12.42□□□□□ -0.42
UBA3-201ENST00000349511 ELAVL4P26378 380 aaKnown RBP12.42□□□□□ -0.42
UBA3-201ENST00000349511 TNFSF8P32971 234 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 GCGRP47871 477 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 PCYT1AP49585 367 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 PDX1P52945 283 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 SNRPGP62308 76 aaKnown RBP12.42□□□□□ -0.42
UBA3-201ENST00000349511 ACY1Q03154 408 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 DUSP8Q13202 625 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 ILKQ13418 452 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 SLX4IPQ5VYV7 408 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 COMTD1Q86VU5 262 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 LSRQ86X29 649 aaPredicted RBP12.42□□□□□ -0.42
UBA3-201ENST00000349511 SLITRK4Q8IW52 837 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 IL17RDQ8NFM7 739 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 VANGL1Q8TAA9 524 aaPredicted RBP12.42□□□□□ -0.42
UBA3-201ENST00000349511 CTHRC1Q96CG8 243 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 SLC30A2Q9BRI3 323 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 ASPNQ9BXN1 380 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 SMURF1Q9HCE7 757 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 EXOSC4Q9NPD3 245 aaKnown RBP12.42□□□□□ -0.42
UBA3-201ENST00000349511 PNO1Q9NRX1 252 aaKnown RBP12.42□□□□□ -0.42
UBA3-201ENST00000349511 LANCL2Q9NS86 450 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 C14orf119Q9NWQ9 140 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 DNAJC27Q9NZQ0 273 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 CRNNQ9UBG3 495 aaPredicted RBP12.42□□□□□ -0.42
UBA3-201ENST00000349511 CTSFQ9UBX1 484 aa12.42□□□□□ -0.42
UBA3-201ENST00000349511 LSM2Q9Y333 95 aaKnown RBP12.42□□□□□ -0.42
UBA3-201ENST00000349511 EFCAB7A8K855 629 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 PLOD3O60568 738 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 ZIC2O95409 532 aaPredicted RBP12.41□□□□□ -0.42
UBA3-201ENST00000349511 APOA1P02647 267 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 ANKRD34CP0C6C1 535 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 RPS19P39019 145 aaKnown RBP12.41□□□□□ -0.42
UBA3-201ENST00000349511 SOX3P41225 446 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 NKX2-5P52952 324 aaPredicted RBP12.41□□□□□ -0.42
UBA3-201ENST00000349511 NNATQ16517 81 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 ZNF362Q5T0B9 420 aaPredicted RBP12.41□□□□□ -0.42
UBA3-201ENST00000349511 DCST1Q5T197 706 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 FAAH2Q6GMR7 532 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 TCTN3Q6NUS6 607 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 CDC73Q6P1J9 531 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 RBM45Q8IUH3 476 aaKnown RBP12.41□□□□□ -0.42
UBA3-201ENST00000349511 SLC34A3Q8N130 599 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 CACTIN-AS1Q8N1I8 211 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 TMEM80Q96HE8 168 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 CCDC32Q9BV29 185 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 SIAEQ9HAT2 523 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 FBXO34Q9NWN3 711 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 NTMQ9P121 344 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 RARRES3Q9UL19 164 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 MGAT4BQ9UQ53 548 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 ERVK-19Q9WJR5 959 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 DTX4Q9Y2E6 619 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 NTN3O00634 580 aaPredicted RBP12.41□□□□□ -0.42
UBA3-201ENST00000349511 OR10H3O60404 316 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 MSL3P1P0C860 447 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 CCL4P13236 92 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 S1PR1P21453 382 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 NR4A2P43354 598 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 HSD17B7P56937 341 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 DSG2Q14126 1118 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 NCF4Q15080 339 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 CCDC92Q53HC0 331 aaPredicted RBP12.41□□□□□ -0.42
UBA3-201ENST00000349511 TMEM201Q5SNT2 666 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 MEDAGQ5VYS4 303 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 C12orf73Q69YU5 71 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 FIGNL1Q6PIW4 674 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 DBX2Q6ZNG2 339 aa12.41□□□□□ -0.42
UBA3-201ENST00000349511 OR4D11Q8NGI4 311 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms