RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 ETV5P41161 510 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 ETV1P50549 477 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 ILKQ13418 452 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 SYT14P1Q58G82 188 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 PLBD1Q6P4A8 553 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 ABI3BPQ7Z7G0 1075 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 AHCTF1Q8WYP5 2266 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 TMEM80Q96HE8 168 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 TMED9Q9BVK6 235 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 RANGRFQ9HD47 186 aaPredicted RBP12.91□□□□□ -0.34
TRIM4-201ENST00000349062 ENOPH1Q9UHY7 261 aa12.91□□□□□ -0.34
TRIM4-201ENST00000349062 PTTG1O95997 202 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 SMSP52788 366 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 OR1D5P58170 312 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 TUBA1BP68363 451 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 C22orf42Q6IC83 251 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 TUBA1AQ71U36 451 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 RAB43Q86YS6 212 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 CA13Q8N1Q1 262 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 C19orf47Q8N9M1 422 aaKnown RBP12.9□□□□□ -0.34
TRIM4-201ENST00000349062 IL17RDQ8NFM7 739 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 IFT27Q9BW83 186 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 MTHFD2LQ9H903 347 aaPredicted RBP12.9□□□□□ -0.34
TRIM4-201ENST00000349062 KCNE5Q9UJ90 142 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 PILRAQ9UKJ1 303 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 WDFY3Q8IZQ1 3526 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 IGHV5-51A0A0C4DH38 117 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 A0A1W2PRQ8 180 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 CSO75390 466 aaKnown RBP12.9□□□□□ -0.34
TRIM4-201ENST00000349062 SOX18P35713 384 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 BLKP51451 505 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 CDH11P55287 796 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 CPOQ8IVL8 374 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 OR5M3Q8NGP4 307 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 OR13C2Q8NGS9 318 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 THAP3Q8WTV1 239 aaPredicted RBP12.9□□□□□ -0.34
TRIM4-201ENST00000349062 TEKT2Q9UIF3 430 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 LIPT1Q9Y234 373 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 TTC28Q96AY4 2481 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 MEN1O00255 615 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 MAGEB4O15481 346 aaPredicted RBP12.9□□□□□ -0.34
TRIM4-201ENST00000349062 SNX4O95219 450 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 THY1P04216 161 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 CLEC2LP0C7M8 214 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 RAB25P57735 213 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 POU6F2P78424 691 aaPredicted RBP12.9□□□□□ -0.34
TRIM4-201ENST00000349062 ZNF45Q02386 682 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 C1DQ13901 141 aaKnown RBP12.9□□□□□ -0.34
TRIM4-201ENST00000349062 TBCEQ15813 527 aaPredicted RBP12.9□□□□□ -0.34
TRIM4-201ENST00000349062 CCDC157Q569K6 752 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 SLC46A3Q7Z3Q1 461 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 SYT14Q8NB59 555 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 SLC38A2Q96QD8 506 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 RPL36Q9Y3U8 105 aaKnown RBP12.9□□□□□ -0.34
TRIM4-201ENST00000349062 PEX16Q9Y5Y5 336 aa12.9□□□□□ -0.34
TRIM4-201ENST00000349062 IGHV1OR15-9A0A0B4J2B8 117 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 C17orf51A8MQB3 221 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 TBX19O60806 448 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 GPX5O75715 221 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 TNFSF8P32971 234 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 CDC20Q12834 499 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 CAMK2BQ13554 666 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 ELOAQ14241 798 aaKnown RBP12.89□□□□□ -0.35
TRIM4-201ENST00000349062 SLX4IPQ5VYV7 408 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 MORN4Q8NDC4 146 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 ANKK1Q8NFD2 765 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 SFXN5Q8TD22 340 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 ZNF582Q96NG8 517 aaPredicted RBP12.89□□□□□ -0.35
TRIM4-201ENST00000349062 COQ7Q99807 217 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 SLC30A2Q9BRI3 323 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 HDHD5Q9BXW7 423 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 SLC7A5P2Q9GIP4 190 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 PRDM6Q9NQX0 595 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 COQ3Q9NZJ6 369 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 MUTYHQ9UIF7 546 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 PCDHGB1Q9Y5G3 927 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 HS3ST3A1Q9Y663 406 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 KIR2DS5A0A0G2JLQ3 304 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 A0A0G2JNG1 304 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 OR6C70A6NIJ9 312 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 ZSCAN5BA6NJL1 495 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 KIR2DS3K7RE56 304 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 KHNYNO15037 678 aaKnown RBP12.89□□□□□ -0.35
TRIM4-201ENST00000349062 HPGDP15428 266 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 KIR2DS5Q14953 304 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 OR1Q1Q15612 314 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 OTPQ5XKR4 325 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 LYPD8Q6UX82 237 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 RFPL4BQ6ZWI9 263 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 OR2B2Q9GZK3 357 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 PRTFDC1Q9NRG1 225 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 CALML5Q9NZT1 146 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 FAM186AA6NE01 2351 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 CPED1A4D0V7 1026 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 FAM171A2A8MVW0 826 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 CLUP10909 449 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 BCKDHBP21953 392 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 IFNGR2P38484 337 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 HTR3AP46098 478 aa12.89□□□□□ -0.35
TRIM4-201ENST00000349062 EMDP50402 254 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms