RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 C19orf25Q9UFG5 118 aaPredicted RBP10.48□□□□□ -0.73
SMARCE1-202ENST00000348513 LOC105369274A0A096LPK9 316 aa10.48□□□□□ -0.73
SMARCE1-202ENST00000348513 TGM1P22735 817 aa10.48□□□□□ -0.73
SMARCE1-202ENST00000348513 TBPL1P62380 186 aa10.48□□□□□ -0.73
SMARCE1-202ENST00000348513 ZNF33AQ06730 810 aa10.48□□□□□ -0.73
SMARCE1-202ENST00000348513 SLAMF1Q13291 335 aa10.48□□□□□ -0.73
SMARCE1-202ENST00000348513 ABCA11PQ4W5N1 156 aa10.48□□□□□ -0.73
SMARCE1-202ENST00000348513 OR2B11Q5JQS5 317 aa10.48□□□□□ -0.73
SMARCE1-202ENST00000348513 C1orf220Q5T0J3 134 aa10.48□□□□□ -0.73
SMARCE1-202ENST00000348513 GPR139Q6DWJ6 353 aa10.48□□□□□ -0.73
SMARCE1-202ENST00000348513 GDPD3Q7L5L3 318 aa10.48□□□□□ -0.73
SMARCE1-202ENST00000348513 ASPGQ86U10 573 aa10.48□□□□□ -0.73
SMARCE1-202ENST00000348513 OR4N4Q8N0Y3 316 aa10.48□□□□□ -0.73
SMARCE1-202ENST00000348513 YIPF5Q969M3 257 aa10.48□□□□□ -0.73
SMARCE1-202ENST00000348513 HDHD5Q9BXW7 423 aa10.48□□□□□ -0.73
SMARCE1-202ENST00000348513 MRPL22Q9NWU5 206 aaKnown RBP10.48□□□□□ -0.73
SMARCE1-202ENST00000348513 FGF3P11487 239 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 CRHBPP24387 322 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 EDNRBP24530 442 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 OR2B8PP59922 312 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 ALKBH1Q13686 389 aaKnown RBP10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 RUNX3Q13761 415 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 CARD17Q5XLA6 110 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 DCUN1D4Q92564 292 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 DPF1Q92782 380 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 F2RL3Q96RI0 385 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 ZNF559Q9BR84 538 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 C11orf54Q9H0W9 315 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 OR51M1Q9H341 326 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 CRLF2Q9HC73 371 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 HCFC1R1Q9NWW0 138 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 WASH3PC4AMC7 463 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 OR2T1O43869 369 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 HNRNPA1P09651 372 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 RHCEP18577 417 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 UBE2KP61086 200 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 SPOCK1Q08629 439 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 TMEM107Q6UX40 140 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 ZSWIM9Q86XI8 627 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 OR4N5Q8IXE1 308 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 NPWQ8N729 165 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 C16orf78Q8WTQ4 265 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 MOB1AQ9H8S9 216 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 B3GAT2Q9NPZ5 323 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 RBFOX1Q9NWB1 397 aaKnown RBP10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 APOBEC3BQ9UH17 382 aaKnown RBP10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 GJD2Q9UKL4 321 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 PIAS3Q9Y6X2 628 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 ZNF878C9JN71 531 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 CLEC3BP05452 202 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 GSTM3P21266 225 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 ENPP1P22413 925 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 SSTR4P31391 388 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 BMPR1AP36894 532 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 FABP6P51161 128 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 RPS26P62854 115 aaKnown RBP10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 SAPCD1Q5SSQ6 148 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 CD276Q5ZPR3 534 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 ADAM5Q6NVV9 412 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 TIFABQ6ZNK6 161 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 PNPLA1Q8N8W4 532 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 CHST14Q8NCH0 376 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 CASTOR1Q8WTX7 329 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 RSPRY1Q96DX4 576 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 LINC00597Q9H2U6 94 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 OLAHQ9NV23 265 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 OARD1Q9Y530 152 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 KPTNQ9Y664 436 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 ZNF670-ZNF695F2Z2N8 137 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 LAMTOR5O43504 91 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 ITGA5P08648 1049 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 IGFBP1P08833 259 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 EMP3P54852 163 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 RING1Q06587 406 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 CST6Q15828 149 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 TMEM88Q6PEY1 159 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 UMODL1-AS1Q8N2C9 162 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 SLC23A1Q9UHI7 598 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 FAM96BQ9Y3D0 163 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 PCDHB14Q9Y5E9 798 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 CORINQ9Y5Q5 1042 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 V9GYS6 101 aa10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 PHRF1Q9P1Y6 1649 aaKnown RBP10.47□□□□□ -0.73
SMARCE1-202ENST00000348513 GPR89AB7ZAQ6 455 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 NPIPA2E9PIF3 369 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 NPIPA3F8WFD2 350 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 HCRTR2O43614 444 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 ARL6IP5O75915 188 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 SLC16A8O95907 504 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 QDPRP09417 244 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 GPR89BP0CG08 455 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 C1GALT1C1LP0DN25 315 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 CD81P60033 236 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 FABP9Q0Z7S8 132 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 CDK5R2Q13319 367 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 NFATC4Q14934 902 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 LRRC26Q2I0M4 334 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 Q5PR19 223 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 ZNF783Q6ZMS7 281 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 ETV3LQ6ZN32 361 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms