RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 FAIM2Q9BWQ8 316 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 PLA2G12AQ9BZM1 189 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 SPRTNQ9H040 489 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-202ENST00000347617 IL20Q9NYY1 176 aa14.8□□□□□ -0.04
HMGA1-202ENST00000347617 DNMT3AQ9Y6K1 912 aaPredicted RBP14.8□□□□□ -0.04
HMGA1-202ENST00000347617 A0A0G2JPF8 293 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 MFSD2BA6NFX1 497 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 HNRNPCL2B2RXH8 293 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 GPR89AB7ZAQ6 455 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 HNRNPCL3B7ZW38 293 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 LILRB5O75023 590 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 TMEM127O75204 238 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 PEX14O75381 377 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 MTX2O75431 263 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 C1orf105O95561 183 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 GBAP04062 536 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 GPR89BP0CG08 455 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 HNRNPCL4P0DMR1 293 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 DRD2P14416 443 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 DRD1P21728 446 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 FPR3P25089 353 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 CTHP32929 405 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 CD79BP40259 229 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 CTSCP53634 463 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 ST3GAL2Q16842 350 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 COL13A1Q5TAT6 717 aaPredicted RBP14.79□□□□□ -0.04
HMGA1-202ENST00000347617 METTL11BQ5VVY1 283 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 FAM198BQ6UWH4 519 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 RRM2BQ7LG56 351 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 KLBQ86Z14 1044 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 ACBD7Q8N6N7 88 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 GIMAP1Q8WWP7 306 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 ST8SIA4Q92187 359 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 KLHL15Q96M94 604 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 MFRPQ9BY79 579 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 SLC6A15Q9H2J7 730 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 FN3KQ9H479 309 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 LDAHQ9H6V9 325 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 EGLN3Q9H6Z9 239 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 SIRT3Q9NTG7 399 aaPredicted RBP14.79□□□□□ -0.04
HMGA1-202ENST00000347617 SDHAF2Q9NX18 166 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 PFDN2Q9UHV9 154 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 CAMK2AQ9UQM7 478 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 RASD1Q9Y272 281 aa14.79□□□□□ -0.04
HMGA1-202ENST00000347617 LRRK1Q38SD2 2015 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 OR2AG2A6NM03 316 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 J3QRE1 110 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 M0R3H8 397 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 LRRTM2O43300 516 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 PI15O43692 258 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 STX11O75558 287 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 APOL3O95236 402 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 TFPIP10646 304 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 GIFP27352 417 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 CALCRP30988 508 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 ATP6V1E1P36543 226 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 ARFIP1P53367 373 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 TAS2R38P59533 333 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 ST3GAL3Q11203 375 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 PGGHGQ32M88 737 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 ZNF791Q3KP31 576 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-202ENST00000347617 CCSMST1Q4G0I0 132 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 SEZ6L2Q6UXD5 910 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 TFAP2EQ6VUC0 442 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 C3P1Q6ZMU1 363 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 CXXC5Q7LFL8 322 aaKnown RBP14.78□□□□□ -0.04
HMGA1-202ENST00000347617 FTMTQ8N4E7 242 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 EID2Q8N6I1 236 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 OR4F15Q8NGB8 312 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 OR6C4Q8NGE1 309 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 OR8D4Q8NGM9 314 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 OR9A1PQ8NGU1 263 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 TRMT10AQ8TBZ6 339 aaKnown RBP14.78□□□□□ -0.04
HMGA1-202ENST00000347617 HSD17B8Q92506 261 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 RAB8BQ92930 207 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 SGTBQ96EQ0 304 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 GPA33Q99795 319 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 RSPO3Q9BXY4 272 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-202ENST00000347617 RBCK1Q9BYM8 510 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 REG4Q9BYZ8 158 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 DPEP2Q9H4A9 486 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 KRCC1Q9NPI7 259 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-202ENST00000347617 HCN3Q9P1Z3 774 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 A0A087WUU8 490 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 A0A1B0GTQ1 180 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 SAP18O00422 153 aaKnown RBP14.78□□□□□ -0.04
HMGA1-202ENST00000347617 MID1O15344 667 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 HYAL3O43820 417 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-202ENST00000347617 B3GALNT1O75752 331 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 ECDO95905 644 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-202ENST00000347617 RPS26P62854 115 aaKnown RBP14.78□□□□□ -0.04
HMGA1-202ENST00000347617 TRA2BP62995 288 aaKnown RBP14.78□□□□□ -0.04
HMGA1-202ENST00000347617 MRPS21P82921 87 aaKnown RBP14.78□□□□□ -0.04
HMGA1-202ENST00000347617 DECR1Q16698 335 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 C2orf27AQ580R0 203 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 TMEM196Q5HYL7 178 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 ELFN2Q5R3F8 820 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 B3GNTL1Q67FW5 361 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-202ENST00000347617 LCTLQ6UWM7 567 aa14.78□□□□□ -0.04
HMGA1-202ENST00000347617 NLRC3Q7RTR2 1065 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms