RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 LCN9Q8WX39 176 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 ACTRT3Q9BYD9 372 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 FN3KQ9H479 309 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 CLEC1BQ9P126 229 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 DAPP1Q9UN19 280 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 SSR3Q9UNL2 185 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 A0A0G2JMP0 313 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 A0A0X1KG70 313 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 OR6C74A6NCV1 312 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 CCDC182A6NF36 153 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 FABP12A6NFH5 140 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 CYR61O00622 381 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 CDC123O75794 336 aaPredicted RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 SLC2A2P11168 524 aaPredicted RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 ZNF24P17028 368 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 NDUFV2P19404 249 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 NTSP30990 170 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 RFX3P48380 749 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 RPS21P63220 83 aaKnown RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 UBE3AQ05086 875 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 HYAL1Q12794 435 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 COX10Q12887 443 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 NNATQ16517 81 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 PRRT3Q5FWE3 981 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 MRPL2Q5T653 305 aaKnown RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 PPP2R2DQ66LE6 453 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 SLC36A4Q6YBV0 504 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 OR4M2Q8NGB6 313 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 OR51A7Q8NH64 312 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 GNPDA2Q8TDQ7 276 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 CNOT9Q92600 299 aaKnown RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 DNAJA3Q96EY1 480 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 TIMM29Q9BSF4 260 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 TWSG1Q9GZX9 223 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 PCBD2Q9H0N5 130 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 FKRPQ9H9S5 495 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 ADAP2Q9NPF8 381 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 ANKRD10Q9NXR5 420 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 EXOGQ9Y2C4 368 aaKnown RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 SLC9A8Q9Y2E8 581 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 TMEM184BQ9Y519 407 aaPredicted RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 ASXL3Q9C0F0 2248 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 A0A0G2JK05 382 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 TMEM129A0AVI4 362 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 SGK494L7N484 410 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 SEC14L5O43304 696 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 AKR7A2O43488 359 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 AKAP8O43823 692 aaKnown RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 IGHA1P01876 353 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 ADRB1P08588 477 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 TSPAN19P0C672 248 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 MPIP34949 423 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 RAB40BQ12829 278 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 SGCGQ13326 291 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 OR1Q1Q15612 314 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 PGGHGQ32M88 737 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 TBRG1Q3YBR2 411 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 TMEM35AQ53FP2 167 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 RSBN1Q5VWQ0 802 aaPredicted RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 CDC73Q6P1J9 531 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 ZNF322Q6U7Q0 402 aaPredicted RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 MBOAT2Q6ZWT7 520 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 LAPTM4BQ86VI4 370 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 KRT73Q86Y46 540 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 PEX5LQ8IYB4 626 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 OR5J2Q8NH18 312 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 GRHL3Q8TE85 626 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 RELTQ969Z4 430 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 RNF166Q96A37 237 aaPredicted RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 CEP19Q96LK0 163 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 REPIN1Q9BWE0 567 aaKnown RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 OR52D1Q9H346 318 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 KIR3DX1Q9H7L2 352 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 PHPT1Q9NRX4 125 aaPredicted RBP5.6□□□□□ -1.51
CLCN3-201ENST00000347613 PCDHGB2Q9Y5G2 931 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 CLDN16Q9Y5I7 305 aa5.6□□□□□ -1.51
CLCN3-201ENST00000347613 MN1Q10571 1320 aaPredicted RBP5.59□□□□□ -1.51
CLCN3-201ENST00000347613 COL4A2P08572 1712 aa5.59□□□□□ -1.51
CLCN3-201ENST00000347613 LRRC72A6NJI9 287 aa5.59□□□□□ -1.51
CLCN3-201ENST00000347613 C12orf71A8MTZ7 269 aa5.59□□□□□ -1.51
CLCN3-201ENST00000347613 H0YGG7 62 aa5.59□□□□□ -1.51
CLCN3-201ENST00000347613 STK25O00506 426 aa5.59□□□□□ -1.51
CLCN3-201ENST00000347613 ASNA1O43681 348 aa5.59□□□□□ -1.51
CLCN3-201ENST00000347613 IL1AP01583 271 aa5.59□□□□□ -1.51
CLCN3-201ENST00000347613 EIF4EP06730 217 aaKnown RBP5.59□□□□□ -1.51
CLCN3-201ENST00000347613 CCNYL3P0C7X3 344 aa5.59□□□□□ -1.51
CLCN3-201ENST00000347613 NR2F6P10588 404 aa5.59□□□□□ -1.51
CLCN3-201ENST00000347613 ACADMP11310 421 aa5.59□□□□□ -1.51
CLCN3-201ENST00000347613 LAMP2P13473 410 aa5.59□□□□□ -1.51
CLCN3-201ENST00000347613 S1PR1P21453 382 aa5.59□□□□□ -1.51
CLCN3-201ENST00000347613 NDUFS1P28331 727 aa5.59□□□□□ -1.51
CLCN3-201ENST00000347613 MAP3K8P41279 467 aa5.59□□□□□ -1.51
CLCN3-201ENST00000347613 MLLT3P42568 568 aaPredicted RBP5.59□□□□□ -1.51
CLCN3-201ENST00000347613 EFNA3P52797 238 aa5.59□□□□□ -1.51
CLCN3-201ENST00000347613 RGS8P57771 180 aaPredicted RBP5.59□□□□□ -1.51
CLCN3-201ENST00000347613 FOXL2P58012 376 aa5.59□□□□□ -1.51
CLCN3-201ENST00000347613 OR12D2P58182 307 aa5.59□□□□□ -1.51
CLCN3-201ENST00000347613 ARF3P61204 181 aaPredicted RBP5.59□□□□□ -1.51
CLCN3-201ENST00000347613 CD83Q01151 205 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms