RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 A0A087WXM4 84 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 TEX51A0A1B0GUA7 166 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 ZAR1LA6NP61 321 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 FOXD2O60548 495 aaPredicted RBP19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 CDK4P11802 303 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 ATP6V1B1P15313 513 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 ABCD3P28288 659 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 CLDN6P56747 220 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 NRG3P56975 720 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 TUBA4AP68366 448 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 MAD2L1BPQ15013 274 aaPredicted RBP19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 PTGES3Q15185 160 aaKnown RBP19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 TRIP6Q15654 476 aaKnown RBP19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 FNDC7Q5VTL7 733 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 PRICKLE2Q7Z3G6 844 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 GLRX5Q86SX6 157 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 DEPDC4Q8N2C3 294 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 LSMEM1Q8N8F7 131 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 C8orf44Q96CB5 159 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 PRSS27Q9BQR3 290 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 POLR1BQ9H9Y6 1135 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 BLOC1S6Q9UL45 172 aa19.74■□□□□ 0.75
TSPAN3-202ENST00000346495 FRYLO94915 3013 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 TRBV11-1A0A0K0K1C0 115 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 LYPD3O95274 346 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 TGM1P22735 817 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 DHRS13Q6UX07 377 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 C6orf15Q6UXA7 325 aaPredicted RBP19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 CCDC71Q8IV32 467 aaPredicted RBP19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 RNF113BQ8IZP6 322 aaKnown RBP19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 FAM71CQ8NEG0 241 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 OR5L2Q8NGL0 311 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 OR2Y1Q8NGV0 311 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 FAM81AQ8TBF8 368 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 TMEM255BQ8WV15 326 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 PADI1Q9ULC6 663 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 A0A0B4J2E0 115 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 A0A1B0GX12 115 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 PLD2O14939 933 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 KLF7O75840 302 aaPredicted RBP19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 UMODP07911 640 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 NGFRP08138 427 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 UBL4AP11441 157 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 CRHBPP24387 322 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 POU1F1P28069 291 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 OMPP47874 163 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 GSSP48637 474 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 HLCSP50747 726 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 LSM11P83369 360 aaKnown RBP eCLIP19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 TSPAN31Q12999 210 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 STPG1Q5TH74 334 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 LAIR2Q6ISS4 152 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 CNIH3Q8TBE1 160 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 ZNF566Q969W8 418 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 IRF2BPLQ9H1B7 796 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 EXOSC3Q9NQT5 275 aaKnown RBP19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 PCDHGA3Q9Y5H0 932 aa19.73■□□□□ 0.75
TSPAN3-202ENST00000346495 A0A1B0GWA3 101 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 A0A1W2PQD3 144 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 H3BN98 237 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 SLC1A7O00341 560 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 CHP2O43745 196 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 ICOSLGO75144 302 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 ZFAND5O76080 213 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 ANGPTL1O95841 491 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 DLGAP3O95886 979 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 IGHEP01854 428 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 CCDC159P0C7I6 412 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 FOLR3P41439 243 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 RPL5P46777 297 aaKnown RBP19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 CDH15P55291 814 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 GABARAPL2P60520 117 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 CDC42P60953 191 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 CXCR4P61073 352 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 HES3Q5TGS1 186 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 NRMQ8IXM6 262 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 ENTHD1Q8IYW4 607 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 RNF217Q8TC41 542 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 PHOSPHO1Q8TCT1 267 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 TMEM239Q8WW34 195 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 HS6ST2Q96MM7 605 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 GPA33Q99795 319 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 LRFN3Q9BTN0 628 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 RPS6KB2Q9UBS0 482 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 RNF6Q9Y252 685 aa19.72■□□□□ 0.75
TSPAN3-202ENST00000346495 A0A0C4DFX4 3053 aa19.71■□□□□ 0.75
TSPAN3-202ENST00000346495 OR6C70A6NIJ9 312 aa19.71■□□□□ 0.75
TSPAN3-202ENST00000346495 TRIM64CA6NLI5 447 aa19.71■□□□□ 0.75
TSPAN3-202ENST00000346495 GTPBP1O00178 669 aaKnown RBP19.71■□□□□ 0.75
TSPAN3-202ENST00000346495 ADAM11O75078 769 aa19.71■□□□□ 0.75
TSPAN3-202ENST00000346495 SOX14O95416 240 aa19.71■□□□□ 0.75
TSPAN3-202ENST00000346495 TP53P04637 393 aaPredicted RBP19.71■□□□□ 0.75
TSPAN3-202ENST00000346495 TFAP2AP05549 437 aa19.71■□□□□ 0.75
TSPAN3-202ENST00000346495 ENDOUP21128 410 aaKnown RBP19.71■□□□□ 0.75
TSPAN3-202ENST00000346495 IDH2P48735 452 aaKnown RBP19.71■□□□□ 0.75
TSPAN3-202ENST00000346495 NR1H2P55055 460 aa19.71■□□□□ 0.75
TSPAN3-202ENST00000346495 PCOLCEQ15113 449 aa19.71■□□□□ 0.75
TSPAN3-202ENST00000346495 NDUFAF6Q330K2 333 aa19.71■□□□□ 0.75
TSPAN3-202ENST00000346495 TMEM164Q5U3C3 297 aa19.71■□□□□ 0.75
TSPAN3-202ENST00000346495 NLGN4XQ8N0W4 816 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms