RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 C12orf73Q69YU5 71 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 MBOAT2Q6ZWT7 520 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 GRAMD2AQ8IUY3 354 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 APCDD1LQ8NCL9 501 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 PMM1Q92871 262 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 DAZLQ92904 295 aaKnown RBP12.49□□□□□ -0.41
CDC42-202ENST00000344548 WDR77Q9BQA1 342 aaPredicted RBP12.49□□□□□ -0.41
CDC42-202ENST00000344548 WWTR1Q9GZV5 400 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 GPR83Q9NYM4 423 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 COL5A1P20908 1838 aaPredicted RBP12.49□□□□□ -0.41
CDC42-202ENST00000344548 PCNX3Q9H6A9 2034 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 A0A1B0GWA3 101 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 TMX2-CTNND1H3BSU7 103 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 PRKYO43930 277 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 GUSBP08236 651 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 PAX7P23759 505 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 FXYD6P3P58550 94 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 ALDH6A1Q02252 535 aaKnown RBP12.48□□□□□ -0.41
CDC42-202ENST00000344548 TOP3AQ13472 1001 aaPredicted RBP12.48□□□□□ -0.41
CDC42-202ENST00000344548 GINS1Q14691 196 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 FNDC7Q5VTL7 733 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 KIRREL2Q6UWL6 708 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 SLCO6A1Q86UG4 719 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 AGBL5Q8NDL9 886 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 NFAM1Q8NET5 270 aaPredicted RBP12.48□□□□□ -0.41
CDC42-202ENST00000344548 OR14A16Q8NHC5 309 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 THAP3Q8WTV1 239 aaPredicted RBP12.48□□□□□ -0.41
CDC42-202ENST00000344548 GGHQ92820 318 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 ANKRD19PQ9H560 264 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 IMPAD1Q9NX62 359 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 EP300Q09472 2414 aaPredicted RBP12.48□□□□□ -0.41
CDC42-202ENST00000344548 A0A0B4J2E0 115 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 A0A1B0GX12 115 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 FRG2CA6NGY1 282 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 GNB5O14775 395 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 ICOSLGO75144 302 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 SOX30O94993 753 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 WISP1O95388 367 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 UTS2O95399 124 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 IL33O95760 270 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 CSTAP01040 98 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 HEXBP07686 556 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 ZNF883P0CG24 379 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 ETV5P41161 510 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 ST13P50502 369 aaKnown RBP12.48□□□□□ -0.41
CDC42-202ENST00000344548 CDK5Q00535 292 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 COX10Q12887 443 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 TSPAN31Q12999 210 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 ZBED5Q49AG3 693 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 PTCHD4Q6ZW05 846 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 TCEANCQ8N8B7 351 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 GNPDA2Q8TDQ7 276 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 FAR1Q8WVX9 515 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 FGF11Q92914 225 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 DPH1Q9BZG8 443 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 TVP23BQ9NYZ1 205 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 TESQ9UGI8 421 aaKnown RBP12.48□□□□□ -0.41
CDC42-202ENST00000344548 PSORS1C1Q9UIG5 152 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 PCDHGA5Q9Y5G8 931 aa12.48□□□□□ -0.41
CDC42-202ENST00000344548 SYNDIG1LA6NDD5 238 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 GMFGO60234 142 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 ALOX12BO75342 701 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 ONECUT2O95948 504 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 JUNBP17275 347 aaPredicted RBP12.47□□□□□ -0.41
CDC42-202ENST00000344548 SLC5A2P31639 672 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 MLLT10P55197 1068 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 GP2P55259 537 aaKnown RBP12.47□□□□□ -0.41
CDC42-202ENST00000344548 CDC42P60953 191 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 EFNB1P98172 346 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 DOC2BQ14184 412 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 GPR107Q5VW38 600 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 MRPL14Q6P1L8 145 aaKnown RBP12.47□□□□□ -0.41
CDC42-202ENST00000344548 RRM2BQ7LG56 351 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 GPR141Q7Z602 305 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 CLVS1Q8IUQ0 354 aaPredicted RBP12.47□□□□□ -0.41
CDC42-202ENST00000344548 CADM2Q8N3J6 435 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 ZNF441Q8N8Z8 693 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 OR4Q3Q8NH05 313 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 PIGXQ8TBF5 258 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 TMEM239Q8WW34 195 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 LOXL4Q96JB6 756 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.47□□□□□ -0.41
CDC42-202ENST00000344548 TAS2R16Q9NYV7 291 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 DNAJC27Q9NZQ0 273 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 BLOC1S6Q9UL45 172 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 TPRKBQ9Y3C4 175 aa12.47□□□□□ -0.41
CDC42-202ENST00000344548 TMEM200CA6NKL6 621 aa12.46□□□□□ -0.41
CDC42-202ENST00000344548 DYRK3O43781 588 aa12.46□□□□□ -0.41
CDC42-202ENST00000344548 FMO6PO60774 539 aa12.46□□□□□ -0.41
CDC42-202ENST00000344548 ENTPD6O75354 484 aa12.46□□□□□ -0.41
CDC42-202ENST00000344548 REM1O75628 298 aa12.46□□□□□ -0.41
CDC42-202ENST00000344548 MST1P26927 711 aa12.46□□□□□ -0.41
CDC42-202ENST00000344548 EMP2P54851 167 aa12.46□□□□□ -0.41
CDC42-202ENST00000344548 IL11RAQ14626 422 aa12.46□□□□□ -0.41
CDC42-202ENST00000344548 BORAQ6PGQ7 559 aa12.46□□□□□ -0.41
CDC42-202ENST00000344548 DEPDC4Q8N2C3 294 aa12.46□□□□□ -0.41
CDC42-202ENST00000344548 LINC00471Q8N535 108 aa12.46□□□□□ -0.41
CDC42-202ENST00000344548 OR13F1Q8NGS4 319 aa12.46□□□□□ -0.41
CDC42-202ENST00000344548 NR4A3Q92570 626 aa12.46□□□□□ -0.41
CDC42-202ENST00000344548 FKBP14Q9NWM8 211 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms