RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 HSD11B1P28845 292 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ANKRD16Q6P6B7 361 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF621Q6ZSS3 439 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 RBM23Q86U06 439 aaKnown RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 SIDT2Q8NBJ9 832 aaKnown RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 LIN7CQ9NUP9 197 aaKnown RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF701Q9NV72 531 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 NUP214P35658 2090 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 UNC13BO14795 1591 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 COL3A1P02461 1466 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 NT5EP21589 574 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 MXD1Q05195 221 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ZYXQ15942 572 aaKnown RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 POMZP3Q6PJE2 187 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 CPNE8Q86YQ8 564 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 SLC44A5Q8NCS7 719 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 GRAPLQ8TC17 118 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 CLSTN3Q9BQT9 956 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 OR2S2Q9NQN1 319 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 FBXW2Q9UKT8 454 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 PTPRMP28827 1452 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 NPIPB8E9PQR5 432 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 PCDH7O60245 1069 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 SLC6A1P30531 599 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM240Q5SV17 173 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 RNASEH2CQ8TDP1 164 aaKnown RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 PCNPQ8WW12 178 aaKnown RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 RBMXL1Q96E39 390 aaKnown RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 NLGN3Q9NZ94 848 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 BCL9LQ86UU0 1499 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 NSG1A0A0A6YYJ2 146 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 FAM237BA0A1B0GVD1 139 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 MMP23AO75900 390 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 PCCBP05166 539 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 DDTP30046 118 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 NSG1P42857 185 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 CLCN3P51790 818 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 HERV-K104P61576 105 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 EVX2Q03828 476 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 BOP1Q14137 746 aaKnown RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 SPHARQ15513 63 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 PPM1JQ5JR12 505 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 NHLRC3Q5JS37 347 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 MIIPQ5JXC2 388 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 DEGS2Q6QHC5 323 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 PYURFQ96I23 114 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 NDUFAF3Q9BU61 184 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 WIZO95785 1651 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 M0QYV0 167 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 CCSO14618 274 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 PRAMEF12O95522 483 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 HLA-AP01891 365 aaKnown RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 PPBPP02775 128 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 OR4Q2P0C623 313 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 SLC35A2P78381 396 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 UBAP2LQ14157 1087 aaKnown RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 USP17L2Q6R6M4 530 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ERN2Q76MJ5 926 aaKnown RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ILDR1Q86SU0 546 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 VASH2Q86V25 355 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 UEVLDQ8IX04 471 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 BVESQ8NE79 360 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 FAM83FQ8NEG4 500 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF675Q8TD23 568 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 SLC41A2Q96JW4 573 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 LENG8Q96PV6 779 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ZCCHC4Q9H5U6 513 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 BLOC1S4Q9NUP1 217 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 C14orf119Q9NWQ9 140 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM131LA2VDJ0 1609 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ARRDC5A6NEK1 342 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 GPR171O14626 319 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 EPHX1P07099 455 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 NDUFS1P28331 727 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 PRAMEF20Q5VT98 475 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 OR6M1Q8NGM8 313 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 PINX1Q96BK5 328 aaKnown RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 APMAPQ9HDC9 416 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 BARHL2Q9NY43 387 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 LRIT1Q9P2V4 623 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ACOT8O14734 319 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 CHRNB4P30926 498 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 BCL6P41182 706 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 GTF2A2P52657 109 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 MBTPS1Q14703 1052 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 SLC10A1Q14973 349 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 SLC35D3Q5M8T2 416 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 VRK2Q86Y07 508 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM190Q8WZ59 177 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 GNPNAT1Q96EK6 184 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 IL4I1Q96RQ9 567 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 CGRRF1Q99675 332 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 RXFP3Q9NSD7 469 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 F6UZH7 168 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 CSTAP01040 98 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 TAS2R41P59536 307 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ERVS71-1P61550 626 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ARG2P78540 354 aa3.56□□□□□ -1.84
SYNE2-202ENST00000344113 ARL13AQ5H913 290 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-202ENST00000344113 YIPF7Q8N8F6 280 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms