RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 OR10H2O60403 315 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 GALR3O60755 368 aaPredicted RBP13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 RPS7P62081 194 aaKnown RBP13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 DDI2Q5TDH0 399 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 NXNL2Q5VZ03 156 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 CLDN22Q8N7P3 220 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 ZNF485Q8NCK3 441 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 OR51A7Q8NH64 312 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 FAM210AQ96ND0 272 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 WDFY2Q96P53 400 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 USP36Q9P275 1121 aaKnown RBP13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 CYP8B1Q9UNU6 501 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 OR2W5A6NFC9 320 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 HMGN1P05114 100 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 MRPL3P09001 348 aaKnown RBP13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 PAICSP22234 425 aaKnown RBP13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 OR2B6P58173 313 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 POU6F2P78424 691 aaPredicted RBP13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 KCNJ8Q15842 424 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 PYDC2Q56P42 97 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 THSD4Q6ZMP0 1018 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 ZNF655Q8N720 491 aaPredicted RBP13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 IL17RDQ8NFM7 739 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 SMAP2Q8WU79 429 aaPredicted RBP13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 PTCHD1Q96NR3 888 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 IFT27Q9BW83 186 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 OR51V1Q9H2C8 321 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 DUSP22Q9NRW4 184 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 SLCO1B1Q9Y6L6 691 aa13.81□□□□□ -0.2
VIPAS39-202ENST00000343765 WDFY3Q8IZQ1 3526 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 MN1Q10571 1320 aaPredicted RBP13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 C12orf71A8MTZ7 269 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 B4DGG1 531 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 GNB5O14775 395 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 AKAP8O43823 692 aaKnown RBP13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 PLOD3O60568 738 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 REM1O75628 298 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 ST6GAL1P15907 406 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 BMP7P18075 431 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 RFX2P48378 723 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 YPEL5P62699 121 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 MRPS21P82921 87 aaKnown RBP13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 CSTF1Q05048 431 aaKnown RBP13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 NNATQ16517 81 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 PDZK1Q5T2W1 519 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 NCCRP1Q6ZVX7 275 aaPredicted RBP13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 TMEM99Q8N816 258 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 ATP6V1C2Q8NEY4 427 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 OR4N2Q8NGD1 307 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 CNOT9Q92600 299 aaKnown RBP13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 ITFG2Q969R8 447 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 ABHD8Q96I13 439 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 MSLNLQ96KJ4 702 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 HS6ST2Q96MM7 605 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 SIAEQ9HAT2 523 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 POT1Q9NUX5 634 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 HCN3Q9P1Z3 774 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 ZNF223Q9UK11 482 aaPredicted RBP13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 SHISA3A0PJX4 238 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 TMEM221A6NGB7 291 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 GABRPO00591 440 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 RPS4Y1P22090 263 aaKnown RBP13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 PPM1FP49593 454 aaPredicted RBP13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 UBE2IP63279 158 aaKnown RBP13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 PLAURQ03405 335 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 MGAT2Q10469 447 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 RNF44Q7L0R7 432 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 NEIL3Q8TAT5 605 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 ANKRD9Q96BM1 317 aaPredicted RBP13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 BPIFA2Q96DR5 249 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 ZNF649Q9BS31 505 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 GSDMCQ9BYG8 508 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 MMP28Q9H239 520 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 IL21RQ9HBE5 538 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 MED17Q9NVC6 651 aa13.8□□□□□ -0.2
VIPAS39-202ENST00000343765 A0A087WV62 115 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 IGHV4-34P06331 123 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 CTSEP14091 401 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 NR4A2P43354 598 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 HHEXQ03014 270 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 EOGTQ5NDL2 527 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 ZNF322Q6U7Q0 402 aaPredicted RBP13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 VWA5B2Q8N398 1253 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 CYB561A3Q8NBI2 242 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 TOR1AIP2Q8NFQ8 470 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 OR10H4Q8NGA5 316 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 GPBAR1Q8TDU6 330 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 ISYNA1Q9NPH2 558 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 NDRG2Q9UN36 371 aaKnown RBP13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 EXOGQ9Y2C4 368 aaKnown RBP13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 ENTPD2Q9Y5L3 495 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 HRKO00198 91 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 RFPL3O75679 317 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 CCNKO75909 580 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 CBX7O95931 251 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 IGHA1P01876 353 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 CLUP10909 449 aa13.79□□□□□ -0.2
VIPAS39-202ENST00000343765 EIF2B5Q13144 721 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms