RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PRR23D1E9PI22 279 aaPredicted RBP13.4□□□□□ -0.26
CPSF7-201ENST00000340437 CASC3O15234 703 aaKnown RBP13.4□□□□□ -0.26
CPSF7-201ENST00000340437 C1QBP02746 253 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 TRAPPC2P0DI81 140 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 TRAPPC2BP0DI82 140 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 PRR23D2P0DMB1 279 aaPredicted RBP13.4□□□□□ -0.26
CPSF7-201ENST00000340437 NT5EP21589 574 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 MAGEB1P43366 347 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 IRF4Q15306 451 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 GXYLT1Q4G148 440 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 FAM181AQ8N9Y4 354 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 LCN9Q8WX39 176 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 RBCK1Q9BYM8 510 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 FAM171A2A8MVW0 826 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 PPP1R3DO95685 299 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 TFPIP10646 304 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 F3P13726 295 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 HTR1FP30939 366 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 STAT5AP42229 794 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 P2RX3P56373 397 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 RPL6Q02878 288 aaKnown RBP13.4□□□□□ -0.26
CPSF7-201ENST00000340437 MAPK14Q16539 360 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 DUSP5Q16690 384 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 EOGTQ5NDL2 527 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 SLC48A1Q6P1K1 146 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 CD300LDQ6UXZ3 194 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 ZNF836Q6ZNA1 936 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 REM2Q8IYK8 340 aaPredicted RBP13.4□□□□□ -0.26
CPSF7-201ENST00000340437 OR2L5Q8NG80 312 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 OR4D9Q8NGE8 314 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 ZMYND19Q96E35 227 aaPredicted RBP13.4□□□□□ -0.26
CPSF7-201ENST00000340437 ZNF559Q9BR84 538 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 ACTRT3Q9BYD9 372 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 BCL2L10Q9HD36 194 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 PRSS16Q9NQE7 514 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 LIPT1Q9Y234 373 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 ZNF443Q9Y2A4 671 aaPredicted RBP13.4□□□□□ -0.26
CPSF7-201ENST00000340437 CDH10Q9Y6N8 788 aa13.4□□□□□ -0.26
CPSF7-201ENST00000340437 HMGN1P05114 100 aa13.4□□□□□ -0.27
CPSF7-201ENST00000340437 FRKP42685 505 aaPredicted RBP13.4□□□□□ -0.27
CPSF7-201ENST00000340437 PITPNBP48739 271 aa13.4□□□□□ -0.27
CPSF7-201ENST00000340437 EFNB1P98172 346 aa13.4□□□□□ -0.27
CPSF7-201ENST00000340437 EXOSC7Q15024 291 aaKnown RBP13.4□□□□□ -0.27
CPSF7-201ENST00000340437 THSD4Q6ZMP0 1018 aa13.4□□□□□ -0.27
CPSF7-201ENST00000340437 LUZP2Q86TE4 346 aa13.4□□□□□ -0.27
CPSF7-201ENST00000340437 ARIH2OSQ8N7S6 290 aa13.4□□□□□ -0.27
CPSF7-201ENST00000340437 DNAJA4Q8WW22 397 aaPredicted RBP13.4□□□□□ -0.27
CPSF7-201ENST00000340437 POLMQ9NP87 494 aaPredicted RBP13.4□□□□□ -0.27
CPSF7-201ENST00000340437 TRIM36Q9NQ86 728 aa13.4□□□□□ -0.27
CPSF7-201ENST00000340437 NLGN3Q9NZ94 848 aa13.4□□□□□ -0.27
CPSF7-201ENST00000340437 EIF3KQ9UBQ5 218 aaKnown RBP13.4□□□□□ -0.27
CPSF7-201ENST00000340437 KLHL21Q9UJP4 597 aa13.4□□□□□ -0.27
CPSF7-201ENST00000340437 TBX21Q9UL17 535 aa13.4□□□□□ -0.27
CPSF7-201ENST00000340437 TEX13CA0A0J9YWL9 993 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 CXCL3P19876 107 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 PSMB10P40306 273 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 DGCR2P98153 550 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 DPTQ07507 201 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 RPA4Q13156 261 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 ARHGAP19Q14CB8 494 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 ANKRD33Q7Z3H0 272 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 CDK20Q8IZL9 346 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 POGLUT1Q8NBL1 392 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 TMIEQ8NEW7 156 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 GPR174Q9BXC1 333 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 PAK6Q9NQU5 681 aaPredicted RBP13.39□□□□□ -0.27
CPSF7-201ENST00000340437 CACNG2Q9Y698 323 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 TBC1D3DA0A087WVF3 549 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 TBC1D3IA0A087WXS9 549 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 TBC1D3EA0A087X179 549 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 TBC1D3KA0A087X1G2 549 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 TBC1D3FA6NER0 549 aaPredicted RBP13.39□□□□□ -0.27
CPSF7-201ENST00000340437 TBC1D3LB9A6J9 549 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 TBC1D3HP0C7X1 549 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 ZNF81P51508 661 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 NNATQ16517 81 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 TBC1D3GQ6DHY5 549 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 VASNQ6EMK4 673 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 LAMTOR1Q6IAA8 161 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 TBC1D3CQ6IPX1 549 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 SFXN4Q6P4A7 337 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 MBOAT2Q6ZWT7 520 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 TBC1D3Q8IZP1 549 aaPredicted RBP13.39□□□□□ -0.27
CPSF7-201ENST00000340437 TCTE3Q8IZS6 198 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 UXS1Q8NBZ7 420 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 FAM98AQ8NCA5 519 aaKnown RBP13.39□□□□□ -0.27
CPSF7-201ENST00000340437 OR2L3Q8NG85 312 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 WFIKKN2Q8TEU8 576 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 PTCHD1Q96NR3 888 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 NDC1Q9BTX1 674 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 CACNG6Q9BXT2 260 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 FN3KQ9H479 309 aa13.39□□□□□ -0.27
CPSF7-201ENST00000340437 SIDT1Q9NXL6 827 aaKnown RBP13.39□□□□□ -0.27
CPSF7-201ENST00000340437 SLC19A2O60779 497 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 FZD7O75084 574 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 DDX6P26196 483 aaKnown RBP eCLIP13.38□□□□□ -0.27
CPSF7-201ENST00000340437 ACSM3Q53FZ2 586 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 BICRALQ6AI39 1079 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 KIAA1211LQ6NV74 962 aa13.38□□□□□ -0.27
CPSF7-201ENST00000340437 C7orf61Q8IZ16 206 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms