RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 LRRC25Q8N386 305 aaPredicted RBP11.15□□□□□ -0.63
USP1-201ENST00000339950 SLC44A3Q8N4M1 653 aa11.15□□□□□ -0.63
USP1-201ENST00000339950 BOLLQ8N9W6 283 aaKnown RBP11.15□□□□□ -0.63
USP1-201ENST00000339950 OR7G2Q8NG99 324 aa11.15□□□□□ -0.63
USP1-201ENST00000339950 OR9A4Q8NGU2 314 aa11.15□□□□□ -0.63
USP1-201ENST00000339950 C1orf216Q8TAB5 229 aa11.15□□□□□ -0.63
USP1-201ENST00000339950 PHOSPHO1Q8TCT1 267 aa11.15□□□□□ -0.63
USP1-201ENST00000339950 GNPDA2Q8TDQ7 276 aa11.15□□□□□ -0.63
USP1-201ENST00000339950 HSPA12BQ96MM6 686 aa11.15□□□□□ -0.63
USP1-201ENST00000339950 TSSK2Q96PF2 358 aa11.15□□□□□ -0.63
USP1-201ENST00000339950 PSD2Q9BQI7 771 aa11.15□□□□□ -0.63
USP1-201ENST00000339950 MED31Q9Y3C7 131 aa11.15□□□□□ -0.63
USP1-201ENST00000339950 ALG5Q9Y673 324 aa11.15□□□□□ -0.63
USP1-201ENST00000339950 TSC2P49815 1807 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 GXYLT2A0PJZ3 443 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 PRAMEF27A3QJZ7 478 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 POM121CA8CG34 1229 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 FAM25EA8MYX2 175 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 MOSPD3O75425 235 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 OR6A2O95222 327 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 BICRALQ6AI39 1079 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 SLC25A25Q6KCM7 469 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 LILRA6Q6PI73 481 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 OR56A1Q8NGH5 318 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 OR2A1Q8NGT9 310 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 THEM6Q8WUY1 208 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 ELF4Q99607 663 aaPredicted RBP11.14□□□□□ -0.63
USP1-201ENST00000339950 PCBD2Q9H0N5 130 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 OR10A4Q9H209 315 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 TMEM38AQ9H6F2 299 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 SLC28A3Q9HAS3 691 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 FTSJ1Q9UET6 329 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 A4GNTQ9UNA3 340 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 ADAM18Q9Y3Q7 739 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 PTPRDP23468 1912 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 EIF1AYO14602 144 aaKnown RBP11.14□□□□□ -0.63
USP1-201ENST00000339950 FMO6PO60774 539 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 OR7A10O76100 309 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 CSF3P09919 207 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 GIFP27352 417 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 NTRK2Q16620 822 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 SLX4IPQ5VYV7 408 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 NRROSQ86YC3 692 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 PIAS4Q8N2W9 510 aaPredicted RBP11.14□□□□□ -0.63
USP1-201ENST00000339950 SRFBP1Q8NEF9 429 aaKnown RBP11.14□□□□□ -0.63
USP1-201ENST00000339950 OR2L3Q8NG85 312 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 CREB3L4Q8TEY5 395 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 COQ10AQ96MF6 247 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 SYNPO2LQ9H987 977 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 TAS2R7Q9NYW3 318 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 MARK1Q9P0L2 795 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 ING1Q9UK53 422 aaPredicted RBP11.14□□□□□ -0.63
USP1-201ENST00000339950 KLK4Q9Y5K2 254 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 MAS1P04201 325 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 EN2P19622 333 aaPredicted RBP11.14□□□□□ -0.63
USP1-201ENST00000339950 TEAD1P28347 426 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 HTR3AP46098 478 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 PPP2CBP62714 309 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 PPP2CAP67775 309 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 RHAGQ02094 409 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 NAXEQ8NCW5 288 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 IL17RDQ8NFM7 739 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 SLC35A4Q96G79 324 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 PRRC1Q96M27 445 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 GINS4Q9BRT9 223 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 NDC1Q9BTX1 674 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 CLDND1Q9NY35 253 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 IER3IP1Q9Y5U9 82 aa11.14□□□□□ -0.63
USP1-201ENST00000339950 TP53BP1Q12888 1972 aaPredicted RBP11.13□□□□□ -0.63
USP1-201ENST00000339950 CENPBD1B2RD01 187 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 ZNF670-ZNF695F2Z2N8 137 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 H3BQ06 376 aaPredicted RBP11.13□□□□□ -0.63
USP1-201ENST00000339950 APOC3P02656 99 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 F13BP05160 661 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 PBX2P40425 430 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 PPP1CAP62136 330 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 ERVK-25P63136 954 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 SMUG1Q53HV7 270 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 OR4N2Q8NGD1 307 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 OR4C15Q8NGM1 316 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 OSTF1Q92882 214 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 C1QTNF7Q9BXJ2 289 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 NRSN2Q9GZP1 204 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 BTBD1Q9H0C5 482 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 ENKD1Q9H0I2 346 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 C20orf141Q9NUB4 165 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 KLHL42Q9P2K6 505 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 ENDOUP21128 410 aaKnown RBP11.13□□□□□ -0.63
USP1-201ENST00000339950 GSTM3P21266 225 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 KIR2DL3P43628 341 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 RPE65Q16518 533 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 LRRC37A5PQ49AS3 106 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 ALG10BQ5I7T1 473 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 ABHD17CQ6PCB6 329 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 FIGLAQ6QHK4 219 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 TTLL10Q6ZVT0 673 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 LAS2Q8IYD9 372 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 NANOGP1Q8N7R0 232 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 OR2L5Q8NG80 312 aa11.13□□□□□ -0.63
USP1-201ENST00000339950 COQ8AQ8NI60 647 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms