RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 SLC6A16Q9GZN6 736 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 PRDM13Q9H4Q3 707 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 MS4A12Q9NXJ0 267 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 ASIC5Q9NY37 505 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 A0A0U1RQF3 1178 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 FAM221AA4D161 298 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 C3orf70A6NLC5 250 aaPredicted RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 M0R036 132 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 ANXA2P07355 339 aaKnown RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 GABRR2P28476 465 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 CD1CP29017 333 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 HIBADHP31937 336 aaKnown RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 TGFBR1P36897 503 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 RPS10P46783 165 aaKnown RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 DVL1P1P54792 670 aaPredicted RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 HSD11B2P80365 405 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 SLC25A11Q02978 314 aaKnown RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 RAB40BQ12829 278 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 GAB1Q13480 694 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF626Q68DY1 528 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 CES3Q6UWW8 571 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 SAMD7Q7Z3H4 446 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 FAM220AQ7Z4H9 259 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 PDZD3Q86UT5 571 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 DENND1CQ8IV53 801 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 LFNGQ8NES3 379 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 OR4C15Q8NGM1 316 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 MRGPRX2Q96LB1 330 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 FGFBP2Q9BYJ0 223 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 CHIAQ9BZP6 476 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 PKIBQ9C010 78 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 ACTR3CQ9C0K3 210 aaPredicted RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 TMEM185BQ9H7F4 350 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 THSD1Q9NS62 852 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 MRPL22Q9NWU5 206 aaKnown RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF330Q9Y3S2 320 aaPredicted RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 TRPM3Q9HCF6 1732 aaPredicted RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 A0A096LPI6 279 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 ABHD14A-ACY1A0A1B0GW23 586 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 A8MWP6 167 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 F5H0A9 414 aaPredicted RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF749O43361 778 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 MELTFP08582 738 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 TBC1D3HP0C7X1 549 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 TXNP10599 105 aaKnown RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF44P15621 663 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 C21orf33P30042 268 aaPredicted RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 CD200P41217 278 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 TNFSF10P50591 281 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 MTAPQ13126 283 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 AIMP2Q13155 320 aaKnown RBP3.9□□□□□ -1.79
NEDD4-201ENST00000338963 VEZF1Q14119 521 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 SCARF1Q14162 830 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 UGT8Q16880 541 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 TMEM88Q6PEY1 159 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 SCIMPQ6UWF3 145 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 CNTN4Q8IWV2 1026 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 STT3BQ8TCJ2 826 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 SMARCD2Q92925 531 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 NUDT11Q96G61 164 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 SYT17Q9BSW7 474 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 SLC52A2Q9HAB3 445 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 OPN4Q9UHM6 478 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 PITPNC1Q9UKF7 332 aa3.9□□□□□ -1.79
NEDD4-201ENST00000338963 USP17L3A6NCW0 530 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CCDC85CA6NKD9 419 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CSF1P09603 554 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CD8BP10966 210 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 GTF2F2P13984 249 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CXCL2P19875 107 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 TBPP20226 339 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CHRNA4P43681 627 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CLCN7P51798 805 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 UBE2G2P60604 165 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 TCP10Q12799 353 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF674Q2M3X9 581 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 TSTD2Q5T7W7 516 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 OLFML2AQ68BL7 652 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 SMARCD3Q6STE5 483 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CYHR1Q6ZMK1 362 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 COLGALT1Q8NBJ5 622 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 OR2M7Q8NG81 312 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CPT1CQ8TCG5 803 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 TNFAIP8L1Q8WVP5 186 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 PEX11GQ96HA9 241 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF583Q96ND8 569 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 BARHL1Q9BZE3 327 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF350Q9GZX5 532 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 ABHD16BQ9H3Z7 469 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 PLEKHA1Q9HB21 404 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 PDE7BQ9NP56 450 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 CYSLTR2Q9NS75 346 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 LRFN1Q9P244 771 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 MYOTQ9UBF9 498 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 KCND3Q9UK17 655 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 FAM208AQ9UK61 1670 aaKnown RBP3.89□□□□□ -1.79
NEDD4-201ENST00000338963 SERTM2A0A1B0GWG4 89 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 NKX6-3A6NJ46 265 aa3.89□□□□□ -1.79
NEDD4-201ENST00000338963 PIP5K1BO14986 540 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms