RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 RASSF6Q6ZTQ3 369 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 BMFQ96LC9 184 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 RBMX2Q9Y388 322 aaKnown RBP5.88□□□□□ -1.47
PRKDC-202ENST00000338368 PTHP01270 115 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 RLN1P04808 185 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 SLC35E2P0CK97 266 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 ACP2P11117 423 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 SYT6Q5T7P8 510 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-202ENST00000338368 FAM69BQ5VUD6 431 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 MBOAT2Q6ZWT7 520 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 MEPCEQ7L2J0 689 aaKnown RBP5.88□□□□□ -1.47
PRKDC-202ENST00000338368 BCDIN3DQ7Z5W3 292 aaKnown RBP5.88□□□□□ -1.47
PRKDC-202ENST00000338368 OR6N1Q8NGY5 312 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 ADOQ96SZ5 270 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 CMKLR1Q99788 373 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 PLEKHA1Q9HB21 404 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF318Q5VUA4 2279 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 A0A075B6Q4 140 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 PPP1R3DO95685 299 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 IGHEP01854 428 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 CD40LGP29965 261 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 CCR5P51681 352 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 MANEAQ5SRI9 462 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 FAHD1Q6P587 224 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 ELL3Q9HB65 397 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-202ENST00000338368 TMEFF2Q9UIK5 374 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-202ENST00000338368 RARRES3Q9UL19 164 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 SLC17A4Q9Y2C5 497 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 H3BSH0 61 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 SYPP08247 313 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 ADAM15Q13444 863 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 PDE7AQ13946 482 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 ALG10Q5BKT4 473 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 SPATC1Q76KD6 591 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 TOMM5Q8N4H5 51 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 OR5L2Q8NGL0 311 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 SPRYD4Q8WW59 207 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-202ENST00000338368 SEMA4GQ9NTN9 838 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 FAIMQ9NVQ4 179 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 LGI1O95970 557 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 NUP62P37198 522 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 POU4F2Q12837 409 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 CCBE1Q6UXH8 406 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 MCEMP1Q8IX19 187 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 OR2AJ1Q8NGZ0 328 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 ZFPM2Q8WW38 1151 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 PHOX2BQ99453 314 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 TAS2R16Q9NYV7 291 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 MBD2Q9UBB5 411 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 LIPAP38571 399 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 CSNK1EP49674 416 aaKnown RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 HNRNPFP52597 415 aaKnown RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 LIN54Q6MZP7 749 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 RNF113BQ8IZP6 322 aaKnown RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 OR6Q1Q8NGQ2 317 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 ZMYND19Q96E35 227 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 COX14Q96I36 57 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 SLC6A18Q96N87 628 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 FRMD6Q96NE9 622 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 EVA1AQ9H8M9 152 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 FGF17O60258 216 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 SLC19A2O60779 497 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 UBE2Q1Q7Z7E8 422 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 DNAJA4Q8WW22 397 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 CBLCQ9ULV8 474 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 PAPLNO95428 1278 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 POU2F2P09086 479 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 CD27P26842 260 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 HLA-CQ95604 372 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 STRADBQ9C0K7 418 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 ANKRD19PQ9H560 264 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 EGLN3Q9H6Z9 239 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 OTOL1A6NHN0 477 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 ST6GAL1P15907 406 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 EIF1AXP47813 144 aaKnown RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 PRPS1P60891 318 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 TMEM225Q6GV28 225 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 Q6ZS52 159 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 KIAA0907Q7Z7F0 614 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 ZER1Q7Z7L7 766 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 PAQR7Q86WK9 346 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 CPNE2Q96FN4 548 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 PNMTP11086 282 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 MLLT11Q13015 90 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 OR2G6Q5TZ20 316 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 C15orf40Q8WUR7 153 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 SDF2Q99470 211 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 GPN1Q9HCN4 374 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-202ENST00000338368 DUSP22Q9NRW4 184 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 LOC105369274A0A096LPK9 316 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 LOC102723532A0A0G2JNH3 316 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 SOX3P41225 446 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 EMP2P54851 167 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 ACTA2P62736 377 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 ACTG2P63267 376 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 DMPKQ09013 629 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 PGBD2Q6P3X8 592 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 OR4N4Q8N0Y3 316 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 AMER3Q8N944 861 aa5.87□□□□□ -1.47
PRKDC-202ENST00000338368 GOT1L1Q8NHS2 421 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms