RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 GPA33Q99795 319 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 NRSN2Q9GZP1 204 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 FLRT3Q9NZU0 649 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 C19orf25Q9UFG5 118 aaPredicted RBP14.23□□□□□ -0.13
LIMS1-202ENST00000338045 GPN3Q9UHW5 284 aaPredicted RBP14.23□□□□□ -0.13
LIMS1-202ENST00000338045 SLC7A7Q9UM01 511 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 LOC102723996A0A087X1L8 192 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 C9J4A7 227 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 ABCB7O75027 752 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 KLF7O75840 302 aaPredicted RBP14.23□□□□□ -0.13
LIMS1-202ENST00000338045 UTS2O95399 124 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 OMPP47874 163 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 HLCSP50747 726 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 CXCR4P61073 352 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 TOP3AQ13472 1001 aaPredicted RBP14.23□□□□□ -0.13
LIMS1-202ENST00000338045 NCF4Q15080 339 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 CCDC157Q569K6 752 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 MBOAT2Q6ZWT7 520 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 PIP4P1Q86T03 277 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 APLFQ8IW19 511 aaPredicted RBP14.23□□□□□ -0.13
LIMS1-202ENST00000338045 IQCF2Q8IXL9 164 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 ENTHD1Q8IYW4 607 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 SLC34A3Q8N130 599 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 OR8K3Q8NH51 312 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 NUBPLQ8TB37 319 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 VMP1Q96GC9 406 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 DDA1Q9BW61 102 aa14.23□□□□□ -0.13
LIMS1-202ENST00000338045 A0A087WXM4 84 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 CSTAP01040 98 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 NGFRP08138 427 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 CCDC159P0C7I6 412 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 ATP6V1B1P15313 513 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 GSTM3P21266 225 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 ABCD3P28288 659 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 RPL5P46777 297 aaKnown RBP14.22□□□□□ -0.13
LIMS1-202ENST00000338045 GSSP48637 474 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 CDH15P55291 814 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 SLC26A5P58743 744 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 HSDL2Q6YN16 418 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 PRICKLE2Q7Z3G6 844 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 GLRX5Q86SX6 157 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 NLGN4XQ8N0W4 816 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 GALNT6Q8NCL4 622 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 CNIH3Q8TBE1 160 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 GNPDA2Q8TDQ7 276 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 TMEM255BQ8WV15 326 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 TAAR9Q96RI9 348 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 ADOQ96SZ5 270 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 PRRX2Q99811 253 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 TRIM2Q9C040 744 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 TMEM27Q9HBJ8 222 aa14.22□□□□□ -0.13
LIMS1-202ENST00000338045 A0A0B4J2E0 115 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 TEX51A0A1B0GUA7 166 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 A0A1B0GX12 115 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 CDC14CA4D256 554 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 SLC1A7O00341 560 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 KLF4O43474 513 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 CSO75390 466 aaKnown RBP14.21□□□□□ -0.13
LIMS1-202ENST00000338045 REM1O75628 298 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 STK17BO94768 372 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 NTN1O95631 604 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 UMODP07911 640 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 PNLIPRP2P54317 469 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 NR1H2P55055 460 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 TSPAN31Q12999 210 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 APOOLQ6UXV4 268 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 WDR88Q6ZMY6 472 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 RRM2BQ7LG56 351 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 ZNF440Q8IYI8 595 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 PRR22Q8IZ63 422 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 RNF113BQ8IZP6 322 aaKnown RBP14.21□□□□□ -0.13
LIMS1-202ENST00000338045 AMER2Q8N7J2 671 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 PIGXQ8TBF5 258 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 UBE2FQ969M7 185 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 OMA1Q96E52 524 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 EXOSC3Q9NQT5 275 aaKnown RBP14.21□□□□□ -0.13
LIMS1-202ENST00000338045 NCDNQ9UBB6 729 aa14.21□□□□□ -0.13
LIMS1-202ENST00000338045 A0A1B0GWA3 101 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 SCDO00767 359 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 CHP2O43745 196 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 WBP4O75554 376 aaKnown RBP14.21□□□□□ -0.14
LIMS1-202ENST00000338045 ANGPTL1O95841 491 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 MT-CO3P00414 261 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 FPR3P25089 353 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 IL12BP29460 328 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 CLDN6P56747 220 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 GABARAPL2P60520 117 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 TEKQ02763 1124 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 PLCXD2Q0VAA5 305 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 EIF3IQ13347 325 aaKnown RBP14.21□□□□□ -0.14
LIMS1-202ENST00000338045 CD226Q15762 336 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 DEPDC4Q8N2C3 294 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 OR2Y1Q8NGV0 311 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 RHOXF1Q8NHV9 184 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 FAM81AQ8TBF8 368 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 APH1BQ8WW43 257 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 C8orf44Q96CB5 159 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 ZNF426Q9BUY5 554 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 SPRY4Q9C004 299 aa14.21□□□□□ -0.14
LIMS1-202ENST00000338045 ADNPQ9H2P0 1102 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms