RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 AHCTF1Q8WYP5 2266 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 SH3PXD2BA1X283 911 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 MASP2O00187 686 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 THY1P04216 161 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 ADARB1P78563 741 aaKnown RBP13.49□□□□□ -0.25
CBX3-201ENST00000337620 CD226Q15762 336 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 ZNF550Q7Z398 422 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 CHERPQ8IWX8 916 aaKnown RBP13.49□□□□□ -0.25
CBX3-201ENST00000337620 GALNT15Q8N3T1 639 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 MARVELD2Q8N4S9 558 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 ZNF559Q9BR84 538 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 FUZQ9BT04 418 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 ANKRD60Q9BZ19 345 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 TMEM27Q9HBJ8 222 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 WDR70Q9NW82 654 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 UBAP1Q9NZ09 502 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 PCDHGB5Q9Y5G0 923 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 PTPRZ1P23471 2315 aaPredicted RBP13.49□□□□□ -0.25
CBX3-201ENST00000337620 TRAPPC13A5PLN9 417 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 OR6C70A6NIJ9 312 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 H3BNH8 94 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 FMO6PO60774 539 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 ADAM11O75078 769 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 PPM1BO75688 479 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 OR2J2O76002 312 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 CDH2P19022 906 aaPredicted RBP13.49□□□□□ -0.25
CBX3-201ENST00000337620 ACAA2P42765 397 aaKnown RBP13.49□□□□□ -0.25
CBX3-201ENST00000337620 FBXW4P57775 412 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 ZNF770Q6IQ21 691 aaPredicted RBP13.49□□□□□ -0.25
CBX3-201ENST00000337620 MARCH3Q86UD3 253 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 NKAIN4Q8IVV8 208 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 IL22RA1Q8N6P7 574 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 ADAMTS14Q8WXS8 1223 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 TBL1XR1Q9BZK7 514 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 MMP25Q9NPA2 562 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 PAPOLBQ9NRJ5 636 aaKnown RBP13.49□□□□□ -0.25
CBX3-201ENST00000337620 CARD8Q9Y2G2 431 aa13.49□□□□□ -0.25
CBX3-201ENST00000337620 MRPS18BQ9Y676 258 aaKnown RBP13.49□□□□□ -0.25
CBX3-201ENST00000337620 A0A087WUU8 490 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 ARRDC5A6NEK1 342 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 H0YAE9 185 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 SLC30A4O14863 429 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 NADKO95544 446 aaPredicted RBP13.48□□□□□ -0.25
CBX3-201ENST00000337620 NTN1O95631 604 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 UBL4AP11441 157 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 CBLP22681 906 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 ADH7P40394 386 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 LSM11P83369 360 aaKnown RBP eCLIP13.48□□□□□ -0.25
CBX3-201ENST00000337620 TTC23Q5W5X9 447 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 KRT80Q6KB66 452 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 ZNF730Q6ZMV8 503 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 RRM2BQ7LG56 351 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 OR4K5Q8NGD3 323 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 GRHL3Q8TE85 626 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 OIT3Q8WWZ8 545 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 PSD2Q9BQI7 771 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 POLR2J2Q9GZM3 115 aaKnown RBP13.48□□□□□ -0.25
CBX3-201ENST00000337620 POLR2J3Q9H1A7 115 aaKnown RBP13.48□□□□□ -0.25
CBX3-201ENST00000337620 FREM2Q5SZK8 3169 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 LOC100130705A0A1B0GUX0 176 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 EIF4E1BA6NMX2 242 aaKnown RBP13.48□□□□□ -0.25
CBX3-201ENST00000337620 ZNF264O43296 627 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 NDUFB5O43674 189 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 CCR4P51679 360 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 EFR3AQ14156 821 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 FNDC7Q5VTL7 733 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 ISLR2Q6UXK2 745 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 CADM2Q8N3J6 435 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 TMCO5AQ8N6Q1 288 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 SLC22A8Q8TCC7 542 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 NKD1Q969G9 470 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 SLC35B4Q969S0 331 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 SH3YL1Q96HL8 342 aaPredicted RBP13.48□□□□□ -0.25
CBX3-201ENST00000337620 RTN4RQ9BZR6 473 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 ANKRD19PQ9H560 264 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 DLL3Q9NYJ7 618 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 FBXL4Q9UKA2 621 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 CDV3Q9UKY7 258 aaKnown RBP13.48□□□□□ -0.25
CBX3-201ENST00000337620 POFUT2Q9Y2G5 429 aa13.48□□□□□ -0.25
CBX3-201ENST00000337620 A0A1W2PQ72 361 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 TERTO14746 1132 aaKnown RBP13.47□□□□□ -0.25
CBX3-201ENST00000337620 OIP5O43482 229 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 SCO2O43819 266 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 PTNP21246 168 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 EVI2BP34910 448 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 ST13P50502 369 aaKnown RBP13.47□□□□□ -0.25
CBX3-201ENST00000337620 NPRL3Q12980 569 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 IL10RAQ13651 578 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 FCRLBQ6BAA4 426 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 PGBD2Q6P3X8 592 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 CBLN3Q6UW01 205 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 TMPRSS7Q7RTY8 843 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 LSRQ86X29 649 aaPredicted RBP13.47□□□□□ -0.25
CBX3-201ENST00000337620 APLFQ8IW19 511 aaPredicted RBP13.47□□□□□ -0.25
CBX3-201ENST00000337620 ZNF440Q8IYI8 595 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 LINC00471Q8N535 108 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 POGLUT1Q8NBL1 392 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 TMEM255BQ8WV15 326 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 MUS81Q96NY9 551 aa13.47□□□□□ -0.25
CBX3-201ENST00000337620 NR1H4Q96RI1 486 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms