RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 SMAD4Q13485 552 aaKnown RBP21.39■■□□□ 1.01
CLPTM1-201ENST00000337392 C22orf42Q6IC83 251 aa21.39■■□□□ 1.01
CLPTM1-201ENST00000337392 PLBD1Q6P4A8 553 aa21.39■■□□□ 1.01
CLPTM1-201ENST00000337392 C19orf48Q6RUI8 117 aa21.39■■□□□ 1.01
CLPTM1-201ENST00000337392 OR52D1Q9H346 318 aa21.39■■□□□ 1.01
CLPTM1-201ENST00000337392 FOLH1BQ9HBA9 442 aa21.39■■□□□ 1.01
CLPTM1-201ENST00000337392 LRIT1Q9P2V4 623 aa21.39■■□□□ 1.01
CLPTM1-201ENST00000337392 C17orf51A8MQB3 221 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 A8MU76 341 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 OR5F1O95221 314 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 FPR3P25089 353 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 MAP3K8P41279 467 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 RPS25P62851 125 aaKnown RBP21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 CARTPTQ16568 116 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 PRTGQ2VWP7 1150 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 SLC36A4Q6YBV0 504 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 CYB561A3Q8NBI2 242 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 RCBTB1Q8NDN9 531 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 TTTY10Q9BZA0 68 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 IL20Q9NYY1 176 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 DHCR7Q9UBM7 475 aaKnown RBP21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 TMEM131Q92545 1883 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 PRODHO43272 600 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 LYPD3O95274 346 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 GYPBP06028 91 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 NME1P15531 152 aaKnown RBP21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 RPS4Y1P22090 263 aaKnown RBP21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 UGT2B10P36537 528 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 RHAGQ02094 409 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 RELAQ04206 551 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 EXOSC6Q5RKV6 272 aaKnown RBP21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 CADM2Q8N3J6 435 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 TMEM239Q8WW34 195 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 UBQLN3Q9H347 655 aa21.38■■□□□ 1.01
CLPTM1-201ENST00000337392 A0A087WV62 115 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 HRO43593 1189 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 IFNA16P05015 189 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 DBIP07108 87 aaKnown RBP21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 SLC35E2P0CK97 266 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 LIMS3P0CW19 117 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 LIMS4P0CW20 117 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 SAGP10523 405 aaPredicted RBP21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 GLULP15104 373 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 ALAS2P22557 587 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 IFNA8P32881 189 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 MLLT3P42568 568 aaPredicted RBP21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 PGGHGQ32M88 737 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 RANBP3LQ86VV4 465 aaPredicted RBP21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 SIRT6Q8N6T7 355 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 SIDT1Q9NXL6 827 aaKnown RBP21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 ITGB1BP2Q9UKP3 347 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 DIMT1Q9UNQ2 313 aaKnown RBP21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 FUOMA2VDF0 154 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 TRAPPC13A5PLN9 417 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 METTL12A8MUP2 240 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 RGS5O15539 181 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 ZNF12P17014 697 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 IFNGR2P38484 337 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 OR1D5P58170 312 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 MEDAGQ5VYS4 303 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 THOC7Q6I9Y2 204 aaKnown RBP21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 GATAD2AQ86YP4 633 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 SIX5Q8N196 739 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 PARP16Q8N5Y8 322 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 KBTBD8Q8NFY9 601 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 OR51G2Q8NGK0 314 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 OR4C3Q8NH37 302 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 HTRA1Q92743 480 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 EFHD2Q96C19 240 aaPredicted RBP21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 SLC38A2Q96QD8 506 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 KLHDC3Q9BQ90 382 aa21.37■■□□□ 1.01
CLPTM1-201ENST00000337392 HYKKA2RU49 373 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 AGR2O95994 175 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 TUBA1BP68363 451 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 BNC1Q01954 994 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 DMWDQ09019 674 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 ELOCQ15369 112 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 TUBA1AQ71U36 451 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 Q8N9G6 341 aaPredicted RBP21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 PROKR2Q8NFJ6 384 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 FANK1Q8TC84 345 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 C14orf119Q9NWQ9 140 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 SLC35F4A4IF30 521 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 MRPL3P09001 348 aaKnown RBP21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 CD27P26842 260 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 NOS3P29474 1203 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 SLC9A3P48764 834 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 SLC16A1P53985 500 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 BCL2A1Q16548 175 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 CLPPQ16740 277 aaPredicted RBP21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 ZMAT1Q5H9K5 638 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 SLC22A16Q86VW1 577 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 LINC00471Q8N535 108 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 NUAK2Q9H093 628 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 MMP27Q9H306 513 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 TRIM45Q9H8W5 580 aaPredicted RBP21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 SLC2A4RGQ9NR83 387 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 ERVK13-1Q9NX77 482 aa21.36■■□□□ 1.01
CLPTM1-201ENST00000337392 CHURC1-FNTBB4DL54 471 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms