RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 NFKBIEO00221 500 aa9.8□□□□□ -0.84
SPTBN1-201ENST00000333896 ZNF8P17098 575 aaPredicted RBP9.8□□□□□ -0.84
SPTBN1-201ENST00000333896 OR1E2P47887 323 aa9.8□□□□□ -0.84
SPTBN1-201ENST00000333896 MRPL19P49406 292 aaKnown RBP9.8□□□□□ -0.84
SPTBN1-201ENST00000333896 PTTG1IPP53801 180 aa9.8□□□□□ -0.84
SPTBN1-201ENST00000333896 BACE1P56817 501 aa9.8□□□□□ -0.84
SPTBN1-201ENST00000333896 ACTR1AP61163 376 aa9.8□□□□□ -0.84
SPTBN1-201ENST00000333896 ZNF648Q5T619 568 aaPredicted RBP9.8□□□□□ -0.84
SPTBN1-201ENST00000333896 OR51Q1Q8NH59 317 aa9.8□□□□□ -0.84
SPTBN1-201ENST00000333896 SPRYD4Q8WW59 207 aaPredicted RBP9.8□□□□□ -0.84
SPTBN1-201ENST00000333896 IL12RB2Q99665 862 aa9.8□□□□□ -0.84
SPTBN1-201ENST00000333896 C20orf85Q9H1P6 137 aa9.8□□□□□ -0.84
SPTBN1-201ENST00000333896 CRTAC1Q9NQ79 661 aa9.8□□□□□ -0.84
SPTBN1-201ENST00000333896 TMEM235A6NFC5 223 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 STATHP02808 62 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 KITLGP21583 273 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 PRKACGP22612 351 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 SOX3P41225 446 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 ATP5IP56385 69 aaPredicted RBP9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 VRK3Q8IV63 474 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 OR1J1Q8NGS3 322 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 SFXN5Q8TD22 340 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 YIPF5Q969M3 257 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 POLDIP3Q9BY77 421 aaKnown RBP9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 SLC32A1Q9H598 525 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 C1GALT1Q9NS00 363 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 SMIM18P0DKX4 95 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 MGMTP16455 207 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 GM2AP17900 193 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 SMAD3P84022 425 aaKnown RBP9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 CEACAM7Q14002 265 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 TMEM156Q8N614 296 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 SLC25A46Q96AG3 418 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 FKRPQ9H9S5 495 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 HHATLQ9HCP6 504 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 RXFP3Q9NSD7 469 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 SLC22A14Q9Y267 594 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 YDJCA8MPS7 323 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 TPOP07202 933 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 CST2P09228 141 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 KCNC1P48547 511 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 PIGFQ07326 219 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 CRHR2Q13324 411 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 KCNC3Q14003 757 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 KCTD18Q6PI47 426 aaPredicted RBP9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 OR51T1Q8NGJ9 327 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 OR6T1Q8NGN1 323 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 OR5M8Q8NGP6 311 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 OR9I1Q8NGQ6 314 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 PGAM5Q96HS1 289 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 TMEM74Q96NL1 305 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 ZNF587Q96SQ5 575 aaPredicted RBP9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 WWTR1Q9GZV5 400 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 OR2AG1Q9H205 316 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 UBTD1Q9HAC8 227 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 C9J4A7 227 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 CCL22O00626 93 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 EPHX1P07099 455 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 ARL2P36404 184 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 HTR3AP46098 478 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 THBS3P49746 956 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 MBOAT1Q6ZNC8 495 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 OR56B1Q8NGI3 324 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 ZNF629Q9UEG4 869 aaPredicted RBP9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 ARL2-SNX15V9GYD0 113 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 PTPRMP28827 1452 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 NDUFS8O00217 210 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 MMP7P09237 267 aaPredicted RBP9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 NAA10P41227 235 aaPredicted RBP9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 SLAMF1Q13291 335 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 TMUB2Q71RG4 321 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 SERPINA11Q86U17 422 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 PIGZQ86VD9 579 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 POLR2AP24928 1970 aaKnown RBP9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 RGPD8O14715 1765 aaPredicted RBP9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 KDM3BQ7LBC6 1761 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 TISP43B9A030 160 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 JTBO76095 146 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 EBLN1P0CF75 366 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 TAL1P17542 331 aaPredicted RBP9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 MRPS34P82930 218 aaKnown RBP9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 C3orf38Q5JPI3 329 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 TRAM1L1Q8N609 369 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 OR6M1Q8NGM8 313 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 FAM46BQ96A09 425 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 SFXN2Q96NB2 322 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 ELOA3CA0A087WX78 387 aaPredicted RBP9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 PMS2P2O95744 297 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 CLCNKBP51801 687 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 HEPHL1Q6MZM0 1159 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 CDH26Q8IXH8 852 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 UBAC2Q8NBM4 344 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 LMF1Q96S06 567 aa9.79□□□□□ -0.84
SPTBN1-201ENST00000333896 UQCRC2P22695 453 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 WASP42768 502 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 UBE2G2P60604 165 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 SRPXP78539 464 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 ADGRF1Q5T601 910 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 PHF19Q5T6S3 580 aa9.78□□□□□ -0.84
SPTBN1-201ENST00000333896 C2CD4CQ8TF44 421 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms