RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 ZNF546Q86UE3 836 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 TMEM173Q86WV6 379 aaPredicted RBP13.18□□□□□ -0.3
EPHB3-201ENST00000330394 ZBTB44Q8NCP5 570 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 FIBINQ8TAL6 211 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 WFDC5Q8TCV5 224 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 FCRL1Q96LA6 429 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 DHRS9Q9BPW9 319 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 MAST2Q6P0Q8 1798 aa13.18□□□□□ -0.3
EPHB3-201ENST00000330394 IGLV3-10A0A075B6K4 115 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 CD34P28906 385 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 TRIM23P36406 574 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 FRKP42685 505 aaPredicted RBP13.17□□□□□ -0.3
EPHB3-201ENST00000330394 RAB5BP61020 215 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 ACTA2P62736 377 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 ACTG2P63267 376 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 FABP5Q01469 135 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 ZNF33BQ06732 778 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 SLCO4C1Q6ZQN7 724 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 GRASPQ7Z6J2 395 aaPredicted RBP13.17□□□□□ -0.3
EPHB3-201ENST00000330394 ADGRF3Q8IZF5 1079 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 LGALS14Q8TCE9 139 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 BRIX1Q8TDN6 353 aaKnown RBP13.17□□□□□ -0.3
EPHB3-201ENST00000330394 AIFM2Q9BRQ8 373 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 GABARAPL3Q9BY60 117 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 CERS4Q9HA82 394 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 SPHK2Q9NRA0 654 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 PNO1Q9NRX1 252 aaKnown RBP13.17□□□□□ -0.3
EPHB3-201ENST00000330394 RXFP3Q9NSD7 469 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 SLC23A1Q9UHI7 598 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 CLEC4EQ9ULY5 219 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 NAALAD2Q9Y3Q0 740 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 CACNA1IQ9P0X4 2223 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 GOLGB1Q14789 3259 aaKnown RBP13.17□□□□□ -0.3
EPHB3-201ENST00000330394 ZC3H12DA2A288 527 aaKnown RBP13.17□□□□□ -0.3
EPHB3-201ENST00000330394 DCNP07585 359 aaKnown RBP13.17□□□□□ -0.3
EPHB3-201ENST00000330394 IGFALSP35858 605 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 CBX5P45973 191 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 ZNF616Q08AN1 781 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 GGTA1PQ4G0N0 100 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 ALG1LQ6GMV1 187 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 BAIAP2L2Q6UXY1 529 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 METTL27Q8N6F8 245 aaPredicted RBP13.17□□□□□ -0.3
EPHB3-201ENST00000330394 TP53I13Q8NBR0 393 aaPredicted RBP13.17□□□□□ -0.3
EPHB3-201ENST00000330394 OVCA2Q8WZ82 227 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 MTHFD2LQ9H903 347 aaPredicted RBP13.17□□□□□ -0.3
EPHB3-201ENST00000330394 TVP23AA6NH52 213 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 RAB3DO95716 219 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 ZNF20P17024 532 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 NPR2P20594 1047 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 HLA-DMAP28067 261 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 PBX2P40425 430 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 AKR1C2P52895 323 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 CLDN2P57739 230 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 AKR1C1Q04828 323 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 TSPAN31Q12999 210 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 FAM27D1Q5T7N8 215 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 LEG1Q6P5S2 330 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 CAMKVQ8NCB2 501 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 BPIFA2Q96DR5 249 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 ATP13A2Q9NQ11 1180 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 WASH6PQ9NQA3 447 aa13.17□□□□□ -0.3
EPHB3-201ENST00000330394 TRABD2BA6NFA1 517 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 ZAR1LA6NP61 321 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 PRAF2O60831 178 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 INHBBP09529 407 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 ZNF750Q32MQ0 723 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 SMUG1Q53HV7 270 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 ZNF362Q5T0B9 420 aaPredicted RBP13.16□□□□□ -0.3
EPHB3-201ENST00000330394 GLT8D1Q68CQ7 371 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 ARHGAP11AQ6P4F7 1023 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 OR5M3Q8NGP4 307 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 HCAR2Q8TDS4 363 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 ST8SIA4Q92187 359 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 GPR174Q9BXC1 333 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 TBL1XR1Q9BZK7 514 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 GABARAPL1Q9H0R8 117 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 MEMO1Q9Y316 297 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 ARAP2Q8WZ64 1704 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 A0A0A6YYJ9 748 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 IGLON5A6NGN9 336 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 SOX1O00570 391 aaPredicted RBP13.16□□□□□ -0.3
EPHB3-201ENST00000330394 KLK8O60259 260 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 C1orf105O95561 183 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 ETHE1O95571 254 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 PLGP00747 810 aaPredicted RBP13.16□□□□□ -0.3
EPHB3-201ENST00000330394 SOD2P04179 222 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 IL12BP29460 328 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 HOXA9P31269 272 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 TMEM205Q6UW68 189 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 C10orf111Q8N326 155 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 OR13C2Q8NGS9 318 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 ADAMTS14Q8WXS8 1223 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 CDS1Q92903 461 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 PITX2Q99697 317 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 MVB12BQ9H7P6 319 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 TRDV1A0A1B0GX56 115 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 ACOT7O00154 380 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 HRO43593 1189 aa13.16□□□□□ -0.3
EPHB3-201ENST00000330394 CDC40O60508 579 aaKnown RBP eCLIP13.16□□□□□ -0.3
EPHB3-201ENST00000330394 IGLV3-25P01717 112 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms